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L1_007_000M1_scaffold_4349_7

Organism: dasL1_007_000M1_metabat_metabat_31_fa_fa

near complete RP 48 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 5877..8951

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 1025.0
  • Bit_score: 2033
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 1026.0
  • Bit_score: 1171
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. SS2/1 RepID=B0NYB3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 1025.0
  • Bit_score: 2033
  • Evalue 0.0

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Taxonomy

Clostridium sp. SS2/1 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3075
GTGTTAGAACATATATTAAAAGACGATCCGGTATACAGACAATTAAAGGATGAGGTCGAAGATTACTGTGGCCCGGTTCTTGTATCAGGATGCACCGATACAGCCAAATGGCATCTGACCAGTCTGATCGGAAATCATAAGAAAAAGCAATTTAAGATTATCATCGTACCAGACGAGAACAAAGCAAGACAATGGGTCGAGGCAAGTCATTTCTTTGGAGAAAAGGTTCAGTATATTCCAGCAAAAGATCCATTATTCTACACAGCCGATGTTCATGGAAATGCAATCGCAAGAGACCGTATGCTGGCAATCAAGAAGATCGTGGATGACAAATGTGGAACCTTTGTGATGACGATCGATGCTGTGATGGATCAGGTTGTTCCATTAAGTGATATCAAGAATCATAAGATGACGTTTAAAATGGGAGAGACACTGGAAGAGGCAACGATCGCAGAAGAATTTGTCGCCAGAGGCTACGAAAAAGCACCATTTGTTGAGGCTCCAGGCGAGTTTTCTGTGCGAGGAGGAATCATTGATATTTTCCCATACACGCAGGAAAGTCCATATCGTATTGAACTATGGGGAGATGAAATTGATTCGATCCGAAGTTTTGATAAAGAAAGCCAAAGATCCATCGAAGAAGTCGATACTCTGACTATTTATCCGGCATCAGAGATCATTTTAAACCAGCCAAGGATTGAACATGGTCTTCGAAATATGGAAGAAGATTATGAGAAGTTATCACAGAAGTTTAAAAAAGAAAAAAAATATGATCAGGAAGCCCGCCTAAGAAAAGAAATGGACCGTGTTCGTGAGGAATTAAGGGAACTTCATATGTTGATCGGAGTAGAAGGTTACCTCCCATATTTTTATGAAAATACAGAATGCATCTTAGATTATTTTCCAGAAGAAAGCATGATCTATCTGGATGAACCAAAACATATCAGAGAACGTGCAGATGCATTTTATCTGGAATTCTCAGAGAGTATGAAAAGCCGTCTGGAAGGTGGGTATCTTCTGCCTAAACAGGCAAATACGGTGACAGATTATGAGAGCATTTTATATCAGATCGAGAAACATAAGATGCTATGTTATTCGATTTTATCTGCTGAGATCAATGATTTTAGAGTTGCTAGAACCTTATTTATGGATACAAAATCCATTCAGTCTTATAACAACAGTTTTGAGCAGTTAGTCAAAGATCTTACCAAATATCAGAGTAAGGACTACAGGATCGTTGTTGCTTCTCCATCTGTTACAAGAGCGAAACGTTTAAGCAGTGATCTGAGAGAAAATGGTTTGGTTGTGACATATGATAAGGACTTGAAATATGGAGTGGAAGCAGGGCAGATTGTTGTCACAGCAGGAAAGCTTCTGACAGGAATTGAATATCCGGCAGCCAAATGGGTATTGATCTCAGAAGGAGACATTTTCAAAGGAAGAGAAGAAAAAAAGCGCCGAAAGAAAGAGAAGAAAAAACAAGGAGAAAAGATCCGAAGTTTTGCAGATATCAATATCGGTGATTACGTTGTTCATGAAAAACATGGAGTCGGTATTTACCGCGGAATCGAAAAGATCACAACAGATGGGGTTGAAAAGGACTACATCAGTATCGAATATCAGGGCGGTGATAATTTATTTATTTTAGCATCAGCCCTAGACCAGATCGCAAAATACGCAAGTGCAAATGCAAGAAAGCCGAAACTTCATAAATTAGGTGGAAATGAATGGAAGAAGACGAAAACACGTGTCAAAGGTCAAGTCAAAGATATTGCGGAAGAACTCGTGCAGTTATATGCACTAAGACAGGCAAAAGAAGGATATGTCTATGATAAGGACTCTGTATGGCAGAAAGAGTTTGAAGAATTATTTCCATACGATGAAACGCAGGATCAGTTAAATGCGATCGATGATACGAAAAGGGATATGGAAAGCAAGAAGATCATGGACCGACTGATCTGTGGAGATGTTGGCTATGGCAAGACAGAAGTAGCGATCCGTGCAGCATTTAAGGCAGTAGACAATGGAAAACAGGTGGCGTATCTCGTACCAACCACGATCCTTGCACAGCAGCATTACAATACATTTGCACAGAGATTTCATGATTACCCGATCACCGTACGTATGATGTCCAGATTTTGTACAGCAAAAGAGCAGAAAGAGACGATCGAAGGACTCAAAAATGGAACGGTAGATGTCGTGATCGGAACGCATCGCTTATTGTCCAAAGACATGCAGTATAAGAATCTGGGACTGCTCGTAATTGATGAAGAACAGCGTTTTGGAGTGACACATAAAGAAAAGATCAAGACAATGAAAAAAGATGTCGATGTCTTATCATTATCTGCTACACCAATTCCAAGAACCCTGCATATGAGTCTGATCGGAATCCGTGACATGAGTGTATTAGAAGAACCACCGCATGACCGAAGAGCGATCCAGACATATGTTATGGAATATAATGAAGAACTGGTCAAAGAAGCGGTCTACCGCGAAATGACACGTGGCGGGCAGGTATATTATGTGTATAACCGTGTCAATAATATCGCAGAAGTGACAGCCGAATTACAGAGATTGCTTCCAGATGCGAAAGTTGCATTTGCACATGGACAGATGAAAGAACGCGAACTGGAAGAGATCATGATGAGATTTATGAACCATGAGATCGATGTTCTGGTATCTACAACGATCATCGAGACAGGACTAGATATTCCGAATGTAAATACAATGATCATTCACGATGCCAACCAGCTTGGGTTGTCCCAGTTGTATCAGTTAAGAGGACGTGTCGGAAGATCAAATCGAAATGCATTTGCATTTTTGATGTACAAAAAGAACACACTGTTAAAAGAAACCGCAGAAAAACGATTACAGGCGATCCGGGAATTTACAGATCTGGGATCCGGTTATAAGATCGCAATGCGAGATCTGGAGATCCGCGGAGCAGGAAATCTTTTGGGACAGGCACAATCCGGTCATATGGAAGCAGTTGGATACGATCTGTATTGCAAGATGCTGAATGAAGCAGTCTTGAGATTAAAAGGCGAATTAAAAGACGAGGATGAATTTGACACA
PROTEIN sequence
Length: 1025
VLEHILKDDPVYRQLKDEVEDYCGPVLVSGCTDTAKWHLTSLIGNHKKKQFKIIIVPDENKARQWVEASHFFGEKVQYIPAKDPLFYTADVHGNAIARDRMLAIKKIVDDKCGTFVMTIDAVMDQVVPLSDIKNHKMTFKMGETLEEATIAEEFVARGYEKAPFVEAPGEFSVRGGIIDIFPYTQESPYRIELWGDEIDSIRSFDKESQRSIEEVDTLTIYPASEIILNQPRIEHGLRNMEEDYEKLSQKFKKEKKYDQEARLRKEMDRVREELRELHMLIGVEGYLPYFYENTECILDYFPEESMIYLDEPKHIRERADAFYLEFSESMKSRLEGGYLLPKQANTVTDYESILYQIEKHKMLCYSILSAEINDFRVARTLFMDTKSIQSYNNSFEQLVKDLTKYQSKDYRIVVASPSVTRAKRLSSDLRENGLVVTYDKDLKYGVEAGQIVVTAGKLLTGIEYPAAKWVLISEGDIFKGREEKKRRKKEKKKQGEKIRSFADINIGDYVVHEKHGVGIYRGIEKITTDGVEKDYISIEYQGGDNLFILASALDQIAKYASANARKPKLHKLGGNEWKKTKTRVKGQVKDIAEELVQLYALRQAKEGYVYDKDSVWQKEFEELFPYDETQDQLNAIDDTKRDMESKKIMDRLICGDVGYGKTEVAIRAAFKAVDNGKQVAYLVPTTILAQQHYNTFAQRFHDYPITVRMMSRFCTAKEQKETIEGLKNGTVDVVIGTHRLLSKDMQYKNLGLLVIDEEQRFGVTHKEKIKTMKKDVDVLSLSATPIPRTLHMSLIGIRDMSVLEEPPHDRRAIQTYVMEYNEELVKEAVYREMTRGGQVYYVYNRVNNIAEVTAELQRLLPDAKVAFAHGQMKERELEEIMMRFMNHEIDVLVSTTIIETGLDIPNVNTMIIHDANQLGLSQLYQLRGRVGRSNRNAFAFLMYKKNTLLKETAEKRLQAIREFTDLGSGYKIAMRDLEIRGAGNLLGQAQSGHMEAVGYDLYCKMLNEAVLRLKGELKDEDEFDT