ggKbase home page

L1_007_000M1_scaffold_4163_8

Organism: dasL1_007_000M1_metabat_metabat_8_fa_sub_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(8514..9047)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 175.0
  • Bit_score: 187
  • Evalue 9.90e-45
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO33695.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 175.0
  • Bit_score: 187
  • Evalue 1.40e-44
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 176.0
  • Bit_score: 159
  • Evalue 6.30e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium 7_1_58FAA → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
ATGTTTCTCTATCTGGCAATGATCGACTCGGATGCGGACAAGTCCAAGTTCGAGATTCTTTACAGCGAATACAAAAATCTGATGTACTACACCGCAAACCGCATTCTGCGCAACAGCAGCGATGCGGAGGACGTGGTGCATCAGGCTTTTCTCAAAGTCATCGAAATTCTGGATACCATTTCTTCACCAAGGTGTCACAAAACGCGTGCGCTGCTCGTCACTATTACCGAGCACAAAGCAATCGACCTGTACCGCGAAAAGCAGCGCCGCAATGTCCTGCCGCTTGCCGAGGAATATATCGGAGCCGCGCCTGCCGCCGAGATCGAGCGTCTCGCCGAGCGCGACACACTGGCCGCCGCTATCGCGTCCCTGCCGCCGCGTTACCACTCGGTCCTGCTCCTGCGGTACGACTGCGGCTATTCCAACGCGGAGATTGCGAATATTCTGGATATGACCGAGCCGAACGTGCGCAAGCTCATCCAGCGTGCCAAGGAAAAACTCAGCGCAGCGCTGAGCGGGATGGAGGAACCGTAA
PROTEIN sequence
Length: 178
MFLYLAMIDSDADKSKFEILYSEYKNLMYYTANRILRNSSDAEDVVHQAFLKVIEILDTISSPRCHKTRALLVTITEHKAIDLYREKQRRNVLPLAEEYIGAAPAAEIERLAERDTLAAAIASLPPRYHSVLLLRYDCGYSNAEIANILDMTEPNVRKLIQRAKEKLSAALSGMEEP*