ggKbase home page

L1_007_029G1_scaffold_2005_5

Organism: L1_007_029G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(2493..2693)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=10 Tax=Lactobacillus rhamnosus RepID=B5QNB7_LACRH similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 140
  • Evalue 5.20e-31
cspC; Cold shock protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 140
  • Evalue 1.50e-31
Cold shock protein CspA {ECO:0000313|EMBL:EKS51173.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 140
  • Evalue 7.30e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus rhamnosus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 201
ATGGAACACGGCACAGTTAAATGGTTCAATGCTGAAAAGGGTTACGGTTTTATCACACGTGAAGATGGCAGCGATGTTTTCGTTCACTTCTCCGCAATCCAAGGCGAAGGTTACAAGACTCTTGAAGAAGGCCAAGCGGTAACGTTTGAAGTTGAAGACAGCGATCGCGGCCCACAAGCGGTTAACGTTAACAAAGACTAA
PROTEIN sequence
Length: 67
MEHGTVKWFNAEKGYGFITREDGSDVFVHFSAIQGEGYKTLEEGQAVTFEVEDSDRGPQAVNVNKD*