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L1_007_061G1_scaffold_449

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_061G1_scaffold_449_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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124..294
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRU0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88021.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L1_007_061G1_scaffold_449_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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366..1712
DNA (1347bp) protein (449aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8JFI5_CLOBU
Sugar ABC transporter sugar-binding protein {ECO:0000313|EMBL:KJZ88010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter
L1_007_061G1_scaffold_449_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1770..2726
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1G5_CLOBU
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EEP55455.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
BadF/BadG/BcrA/BcrD family ATPase
L1_007_061G1_scaffold_449_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2762..3901)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE8_CLOBU
L1_007_061G1_scaffold_449_5
Clostridium sp. IBUN62F, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4216..4692
DNA (477bp) protein (159aa)
PTS system, hyaluronate-oligosaccharide-specific IIB component {ECO:0000313|EMBL:KJZ93520.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ93520.1};; TaxID=1523157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN62F.;"
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Clostridium butyricum RepID=M8J6M0_CLOBU
L1_007_061G1_scaffold_449_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4722..5492
DNA (771bp) protein (257aa)
N-acetylgalactosamine permease iic component 1 n=2 Tax=Clostridium butyricum RepID=B1QXU5_CLOBU
PTS system sorbose-specific IIC component {ECO:0000313|EMBL:EEP55384.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system sorbose-specific transporter subunit IIC
L1_007_061G1_scaffold_449_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5476..6327
DNA (852bp) protein (284aa)
N-acetylgalactosamine permease iid component n=2 Tax=Clostridium butyricum RepID=B1QXU6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96287.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L1_007_061G1_scaffold_449_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6460..7224
DNA (765bp) protein (255aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridium butyricum RepID=M8K263_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30323.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntR family transcriptional regulator
L1_007_061G1_scaffold_449_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7322..8482
DNA (1161bp) protein (387aa)
Putative tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30324.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AgaS protein
L1_007_061G1_scaffold_449_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8501..8932
DNA (432bp) protein (144aa)
Pts system mannose-specific eiiab component n=3 Tax=Clostridium butyricum RepID=B1QXU9_CLOBU
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENZ30325.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system fructose IIA component
L1_007_061G1_scaffold_449_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8977..9831
DNA (855bp) protein (285aa)
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
Class II aldolase, tagatose bisphosphate family n=2 Tax=Clostridium butyricum RepID=B1QXV0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96286.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L1_007_061G1_scaffold_449_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10130..11452
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003754432
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:EKY28742.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L1_007_061G1_scaffold_449_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11786..12694
DNA (909bp) protein (303aa)
Phosphotransbutyrylase {ECO:0000313|EMBL:KJZ87175.1}; EC=2.3.1.19 {ECO:0000313|EMBL:KJZ87175.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ptb; phosphate butyryltransferase Ptb (EC:2.3.1.19)
Phosphate butyryltransferase n=2 Tax=Clostridium butyricum RepID=M8K9M7_CLOBU
L1_007_061G1_scaffold_449_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12792..13859
DNA (1068bp) protein (356aa)
Butyrate kinase {ECO:0000313|EMBL:KHD14834.1}; EC=2.7.2.7 {ECO:0000313|EMBL:KHD14834.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
buk1; butyrate kinase Buk (EC:2.7.2.7)
Probable butyrate kinase n=4 Tax=Clostridium butyricum RepID=B1QZW1_CLOBU
L1_007_061G1_scaffold_449_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14064..14897
DNA (834bp) protein (278aa)
HTH DNA-binding protein n=3 Tax=Clostridium butyricum RepID=B1QZW9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97387.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
HTH DNA-binding protein
L1_007_061G1_scaffold_449_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15214..16239
DNA (1026bp) protein (342aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=4 Tax=Clostridium butyricum RepID=B1QZW2_CLOBU
L1_007_061G1_scaffold_449_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16433..17392)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1IM48_CLOBK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ14716.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L1_007_061G1_scaffold_449_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17407..18894)
DNA (1488bp) protein (496aa)
Membrane-bound O-acyltransferase family protein n=2 Tax=Clostridium botulinum A RepID=A5I6C7_CLOBH
Putative alginate O-acetyltransferase AlgI {ECO:0000313|EMBL:BAQ14715.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
alginate O-acetyltransferase AlgI
L1_007_061G1_scaffold_449_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19162..19467
DNA (306bp) protein (102aa)
TrpR homolog, YerC/YecD family n=3 Tax=Clostridium butyricum RepID=C4IEZ0_CLOBU
TrpR homolog, YerC/YecD family {ECO:0000313|EMBL:EEP55581.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
TrpR like protein, YerC/YecD
L1_007_061G1_scaffold_449_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19633..20985
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
glmM; phosphoglucosamine mutase GlmM (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Clostridium butyricum RepID=B1QZX1_CLOBU
L1_007_061G1_scaffold_449_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21441..22778
DNA (1338bp) protein (446aa)
CBS/transporter domain protein n=2 Tax=Clostridium botulinum B RepID=B2TR44_CLOBB
CBS/transporter domain protein
CBS/transporter domain protein {ECO:0000313|EMBL:ACD21727.1}; Putative modulator of ions transport {ECO:0000313|EMBL:CDH92329.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L1_007_061G1_scaffold_449_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22976..23749)
DNA (774bp) protein (258aa)
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6Y9_9CLOT
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ50959.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
two component transcriptional regulator, AraC family
L1_007_061G1_scaffold_449_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23730..24779)
DNA (1050bp) protein (350aa)
HAMP domain-containing protein,histidine kinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXJ5_9CLOT
HAMP domain-containing protein,histidine kinase {ECO:0000313|EMBL:EKQ50958.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
histidine kinase internal region
L1_007_061G1_scaffold_449_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24843..25601)
DNA (759bp) protein (253aa)
Putative sensor with HAMP domain n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SL47_CLOC7
putative sensor
HAMP domain-containing protein,histidine kinase {ECO:0000313|EMBL:EKQ50958.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Displaying 24 items

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