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L1_007_122G1_scaffold_31

Search features with annotation key words

Displaying items 31-60 of 212 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_31_31
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32922..33674)
DNA (753bp) protein (251aa)
Putative phosphotransferase enzyme family protein n=1 Tax=Clostridium sp. D5 RepID=F0YTN5_9CLOT
Putative phosphotransferase enzyme family protein {ECO:0000313|EMBL:EGB94255.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Phosphotransferase enzyme family.
L1_007_122G1_scaffold_31_32
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33768..36380)
DNA (2613bp) protein (871aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Aldehyde dehydrogenase (NAD) family protein n=2 Tax=Clostridiales RepID=B0NFE4_CLOSV
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_122G1_scaffold_31_33
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(36615..37142)
DNA (528bp) protein (176aa)
50S ribosomal protein L17 n=2 Tax=Clostridium RepID=B6FLG3_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LSU ribosomal protein L17P
L1_007_122G1_scaffold_31_34
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37250..38209)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Clostridium RepID=B6FLG2_9CLOT
DNA-directed RNA polymerase subunit alpha
L1_007_122G1_scaffold_31_35
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(38249..38842)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=4 Tax=Lachnospiraceae RepID=E9RYG4_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
SSU ribosomal protein S4P
L1_007_122G1_scaffold_31_36
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(38865..39260)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=4 Tax=Dorea RepID=A6BIS8_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
SSU ribosomal protein S11P
L1_007_122G1_scaffold_31_37
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(39296..39664)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Coprococcus RepID=C0B6N9_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
rpsM; 30S ribosomal protein S13
L1_007_122G1_scaffold_31_38
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40164..40382)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=17 Tax=Clostridiales RepID=A6BIS6_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
translation initiation factor IF-1
L1_007_122G1_scaffold_31_39
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40408..40656)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6S0U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC54828.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L1_007_122G1_scaffold_31_40
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40666..41433)
DNA (768bp) protein (256aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Coprococcus RepID=C0B6N4_9FIRM
L1_007_122G1_scaffold_31_41
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41436..42080)
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WR93_9FIRM
L1_007_122G1_scaffold_31_42
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(42152..43468)
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=1 Tax=Clostridium sp. D5 RepID=F0YTM5_9CLOT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
protein translocase subunit secY/sec61 alpha
L1_007_122G1_scaffold_31_43
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(43469..43909)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Clostridium nexile CAG:348 RepID=R6QMV7_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
50S ribosomal protein L15
L1_007_122G1_scaffold_31_44
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(43933..44115)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Clostridium sp. D5 RepID=F0YTM3_9CLOT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LSU ribosomal protein L30P
L1_007_122G1_scaffold_31_45
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(44130..44639)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=2 Tax=Lachnospiraceae RepID=F7JY79_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
SSU ribosomal protein S5P
L1_007_122G1_scaffold_31_46
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(44662..45030)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=2 Tax=Coprococcus RepID=C0B6M7_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
rplR; 50S ribosomal protein L18
L1_007_122G1_scaffold_31_47
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(45048..45590)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIR1_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
LSU ribosomal protein L6P
L1_007_122G1_scaffold_31_48
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(45782..46183)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=2 Tax=Coprococcus RepID=C0B6M5_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Ribosomal protein S8
L1_007_122G1_scaffold_31_49
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists


comp(46331..46516)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BXJ8_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Ribosomal protein S14
L1_007_122G1_scaffold_31_50
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(46532..47071)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=5 Tax=Clostridiales RepID=E5XIG1_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
rplE; 50S ribosomal protein L5
L1_007_122G1_scaffold_31_51
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(47095..47406)
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=2 Tax=Clostridium RepID=R6PXY6_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LSU ribosomal protein L24P
L1_007_122G1_scaffold_31_52
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(47421..47789)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4Y3_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
50S ribosomal protein L14
L1_007_122G1_scaffold_31_53
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(47826..48080)
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=2 Tax=Clostridium RepID=B6FLE2_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
30S ribosomal protein S17
L1_007_122G1_scaffold_31_54
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(48095..48301)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=4 Tax=Lachnospiraceae RepID=E9RYI3_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
50S ribosomal protein L29
L1_007_122G1_scaffold_31_55
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(48291..48728)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=2 Tax=Coprococcus RepID=C0B6L8_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
LSU ribosomal protein L16P
L1_007_122G1_scaffold_31_56
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(48728..49384)
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=2 Tax=Coprococcus RepID=C0B6L7_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
SSU ribosomal protein S3P
L1_007_122G1_scaffold_31_57
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(49396..49782)
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=5 Tax=Clostridiales RepID=A6BIQ7_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
LSU ribosomal protein L22P
L1_007_122G1_scaffold_31_58
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(49812..50093)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=2 Tax=Dorea RepID=A6BIQ6_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
SSU ribosomal protein S19P
L1_007_122G1_scaffold_31_59
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(50119..50961)
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB21_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
LSU ribosomal protein L2P
L1_007_122G1_scaffold_31_60
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(51028..51327)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Clostridium sp. D5 RepID=F0YTK7_9CLOT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Ribosomal protein L23
Displaying items 31-60 of 212 in total

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