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L1_007_122G1_scaffold_137

Search features with annotation key words

Displaying items 61-90 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_137_61
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60971..61531
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40710.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Phosphoserine phosphatase
L1_007_122G1_scaffold_137_62
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61656..63170)
DNA (1515bp) protein (505aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74647.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
D-alanyl-D-alanine carboxypeptidase
L1_007_122G1_scaffold_137_63
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63307..64125)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74646.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_137_64
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64277..65653
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP98_9FIRM
L1_007_122G1_scaffold_137_65
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65948..66307)
DNA (360bp) protein (120aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
mRNA interferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP96_9FIRM
Growth inhibitor
L1_007_122G1_scaffold_137_66
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66426..67085)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74828.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
metal dependent phosphohydrolase
L1_007_122G1_scaffold_137_67
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67082..67627)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74827.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_137_68
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67609..68028)
DNA (420bp) protein (140aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phosphopantethiene--protein transferase domain (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP93_9FIRM
L1_007_122G1_scaffold_137_69
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


68659..69678
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP92_9FIRM
phenylalanyl-tRNA synthetase subunit alpha
L1_007_122G1_scaffold_137_70
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


69698..72076
DNA (2379bp) protein (793aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP91_9FIRM
L1_007_122G1_scaffold_137_71
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72259..72504
DNA (246bp) protein (82aa)
YD repeat protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP90_9FIRM
YD repeat protein {ECO:0000313|EMBL:EHL74823.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_137_72
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72526..72831
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74822.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_137_73
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72938..74047)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74821.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_007_122G1_scaffold_137_74
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74183..74986
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74820.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_137_75
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75119..75856
DNA (738bp) protein (246aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP86_9FIRM
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:EHL74819.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_137_76
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76107..77192
DNA (1086bp) protein (362aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP85_9FIRM
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KJF39377.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_137_77
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77427..77945)
DNA (519bp) protein (173aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39378.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
L1_007_122G1_scaffold_137_78
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77945..78589)
DNA (645bp) protein (215aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74816.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_137_79
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78836..79528
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74815.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Predicted transcriptional regulators
L1_007_122G1_scaffold_137_80
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79663..79881)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74814.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_137_81
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80051..81292)
DNA (1242bp) protein (414aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP80_9FIRM
L1_007_122G1_scaffold_137_82
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81413..82867
DNA (1455bp) protein (485aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP79_9FIRM
L1_007_122G1_scaffold_137_83
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83121..85445
DNA (2325bp) protein (775aa)
Stage II sporulation protein E (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP77_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:EHL74892.1}; Flags: Fragment;; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Stage II sporulation protein E (SpoIIE).
L1_007_122G1_scaffold_137_84
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85576..86367
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74891.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Dimethyladenosine transferase (rRNA methylation)
L1_007_122G1_scaffold_137_85
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86449..86841)
DNA (393bp) protein (131aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C043_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG74771.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative acyl-CoA N-acyltransferase
L1_007_122G1_scaffold_137_86
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86950..88200)
DNA (1251bp) protein (417aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP75_9FIRM
L1_007_122G1_scaffold_137_87
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88453..89118
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP74_9FIRM
L1_007_122G1_scaffold_137_88
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89115..89510
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74888.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative lipoprotein
L1_007_122G1_scaffold_137_89
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89549..90304
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74887.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
branched-chain amino acid transporter
L1_007_122G1_scaffold_137_90
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

90305..90622
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RP71_9FIRM
Branched-chain amino acid transporter {ECO:0000313|EMBL:KJF39388.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
Displaying items 61-90 of 112 in total

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