ggKbase home page

L1_007_122G1_scaffold_151_64

Organism: L1_007_122G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: comp(66175..66990)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 263.0
  • Bit_score: 380
  • Evalue 1.70e-102
pseudouridylate synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 244.0
  • Bit_score: 320
  • Evalue 3.30e-85
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. D5 RepID=F0Z4Z9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 263.0
  • Bit_score: 380
  • Evalue 1.20e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. D5 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 816
TTGAGACGAATCAAACTGACGGTTGCCTACGACGGCACCAACTACTGTGGCTGGCAGATCCAGCCCAATGGCATCACCATTGAAGAGGTACTGAATCAGAAACTAAGCAAGCTTACCGGAGAGGAGATCCACGTCATCGGGGCAAGCCGGACGGACTCCGGAGTTCATGCACTGGGAAACATAGCAGTTTTTGATACAAATAGCACAATTCCGCCGGGGCGTTTCGCATGTGCAGTCAATCAGAAGCTTCCGGAAGACATTGTCGTGATCCACTCCGAAGAAGTACCACAGGGATGGCATCCGAGATACCAGGACTGCACGAAGTATTATGAATACCACATTTTAAACAGTCCGATACCAAATCCCCTTTGCCGACTGACCACAAGCCACGTCTCCTTCCCACTGGATGAAGAGAAGATGCAGGCAGCCGCAAATTATCTGACCGGCACCCATGACTTCAAGAGCTTTTGCAACATCCGGACAAACACAGACGACACGATCCGCACGATTTACAGCCTTGACGTCATTCGGGACGGAGAGGAAATCAAGATCCGCGTCAGTGGAAACGGCTTCCTATACAACATGGTACGTATCATCGCCGGTACACTCATCCGGGTTGGCCGTGGCTTCTATCAGCCGGAACAGATCAAAGAGATCCTCGACGCAAAAGAACGTACCGAGGCCGGAGTGACAGCACCACCTCAAGGACTCACGCTGGTTGGTATCGAATATTCGGGTCATGTAGAAAGGGGACAAAACATTTTGCGTCGGAATACGTCCCCGGAAAGGGAAAAGAATGGAAAGAATCTATTTTGA
PROTEIN sequence
Length: 272
LRRIKLTVAYDGTNYCGWQIQPNGITIEEVLNQKLSKLTGEEIHVIGASRTDSGVHALGNIAVFDTNSTIPPGRFACAVNQKLPEDIVVIHSEEVPQGWHPRYQDCTKYYEYHILNSPIPNPLCRLTTSHVSFPLDEEKMQAAANYLTGTHDFKSFCNIRTNTDDTIRTIYSLDVIRDGEEIKIRVSGNGFLYNMVRIIAGTLIRVGRGFYQPEQIKEILDAKERTEAGVTAPPQGLTLVGIEYSGHVERGQNILRRNTSPEREKNGKNLF*