ggKbase home page

L1_007_365G1_scaffold_2

Search features with annotation key words

Displaying items 31-60 of 393 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_2_31
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(39606..40520)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2URQ4_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05139.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_32
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(40517..40978)
DNA (462bp) protein (154aa)
Transcriptional regulator MarR family n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J464_9BACT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDB56045.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
MarR family transcriptional regulator
L1_007_365G1_scaffold_2_33
unknown

Not on your lists

41153..41809
DNA (657bp) protein (219aa)

This feature has no annotations

L1_007_365G1_scaffold_2_34
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(41715..42035)
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Akkermansia RepID=B2URQ6_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD96345.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L1_007_365G1_scaffold_2_35
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(42072..42638)
DNA (567bp) protein (189aa)
Ribosome-recycling factor n=2 Tax=Akkermansia RepID=RRF_AKKM8
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
L1_007_365G1_scaffold_2_36
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(42690..43415)
DNA (726bp) protein (242aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Uridylate kinase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKM0_AKKM8
uridylate kinase
L1_007_365G1_scaffold_2_37
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(43482..44375)
DNA (894bp) protein (298aa)
MscS Mechanosensitive ion channel n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JE26_9BACT
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDB56041.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
L1_007_365G1_scaffold_2_38
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(44636..45259)
DNA (624bp) protein (208aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKM2_AKKM8
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACD05145.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_39
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

45395..47104
DNA (1710bp) protein (570aa)
Transporter n=2 Tax=Akkermansia RepID=B2UKM3_AKKM8
sodium:neurotransmitter symporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_40
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

47207..48766
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J099_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB56038.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L1_007_365G1_scaffold_2_41
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

48802..49005
DNA (204bp) protein (68aa)
Translation initiation factor IF-1 n=2 Tax=Akkermansia RepID=B2UKM5_AKKM8
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000313|EMBL:ACD05148.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_42
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(49170..49778)
DNA (609bp) protein (203aa)
Recombination protein RecR n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JE23_9BACT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
recombination protein RecR
L1_007_365G1_scaffold_2_43
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(49771..50220)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Akkermansia RepID=B2UKM7_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05150.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_44
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(50308..51555)
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Akkermansia RepID=B2UKM8_AKKM8
3-oxoacyl-(acyl-carrier-protein) synthase 2
L1_007_365G1_scaffold_2_45
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(51829..52380)
DNA (552bp) protein (184aa)
Methionine sulfoxide reductase B (EC:1.8.4.11)
Methionine sulfoxide reductase B {ECO:0000313|EMBL:ACD05153.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ACD05153.1};; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Methionine sulfoxide reductase B n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKN0_AKKM8
L1_007_365G1_scaffold_2_46
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(52455..53534)
DNA (1080bp) protein (360aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J095_9BACT
L1_007_365G1_scaffold_2_47
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

53721..55040
DNA (1320bp) protein (440aa)
Major facilitator superfamily MFS_1 n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKN2_AKKM8
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACD05155.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_48
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

55541..56386
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKN4_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05157.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_49
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(56878..57990)
DNA (1113bp) protein (371aa)
ABC-2 type transporter n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKT0_AKKM8
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_50
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(57995..59101)
DNA (1107bp) protein (369aa)
ABC-2 type transporter n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J9J3_9BACT
ABC-2 type transporter {ECO:0000313|EMBL:CDB55349.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
ABC transporter
L1_007_365G1_scaffold_2_51
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(59098..60861)
DNA (1764bp) protein (588aa)
ABC transporter related n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKT2_AKKM8
ABC transporter related {ECO:0000313|EMBL:ACD05205.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
ABC transporter
L1_007_365G1_scaffold_2_52
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(60858..61880)
DNA (1023bp) protein (341aa)
Secretion protein HlyD family protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JZ56_9BACT
Secretion protein HlyD family protein {ECO:0000313|EMBL:CDB55347.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
secretion protein HlyD family protein
L1_007_365G1_scaffold_2_53
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


62014..64842
DNA (2829bp) protein (943aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Alanine--tRNA ligase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=SYA_AKKM8
L1_007_365G1_scaffold_2_54
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

64875..65699
DNA (825bp) protein (275aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J1N3_9BACT
CDP-diacylglycerol/serine O-phosphatidyltransferase {ECO:0000313|EMBL:CDB55345.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
CDP-diacylglycerol/serine O-phosphatidyltransferase
L1_007_365G1_scaffold_2_55
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(65970..66485)
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Akkermansia RepID=B2UKT6_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05209.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_56
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

66550..67389
DNA (840bp) protein (280aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6IYA9_9BACT
L1_007_365G1_scaffold_2_57
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

67397..69988
DNA (2592bp) protein (864aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKT8_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05211.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L1_007_365G1_scaffold_2_58
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

70165..71922
DNA (1758bp) protein (586aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J1M6_9BACT
L1_007_365G1_scaffold_2_59
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

71950..72600
DNA (651bp) protein (217aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J9I4_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDB55339.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
short-chain dehydrogenase/reductase SDR
L1_007_365G1_scaffold_2_60
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

72715..73902
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Akkermansia RepID=B2UKU1_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD05214.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Displaying items 31-60 of 393 in total

View Taxonomy