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L1_007_365G1_scaffold_576

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_576_31
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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29052..30155
DNA (1104bp) protein (368aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DXX3_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDA89126.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L1_007_365G1_scaffold_576_32
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31433..32242
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86440.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC transporter permease
L1_007_365G1_scaffold_576_33
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32247..33047
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86439.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_576_34
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33473..34468
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74688.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_576_35
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34616..35005
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38914.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_576_36
unknown

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comp(34860..35429)
DNA (570bp) protein (190aa)

This feature has no annotations

L1_007_365G1_scaffold_576_37
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35648..36271
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38912.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
transposase
L1_007_365G1_scaffold_576_38
unknown

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comp(36428..37153)
DNA (726bp) protein (242aa)

This feature has no annotations

L1_007_365G1_scaffold_576_39
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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37523..37873
DNA (351bp) protein (117aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9ZMV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET58718.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_007_365G1_scaffold_576_40
unknown

Not on your lists

comp(37839..38096)
DNA (258bp) protein (86aa)

This feature has no annotations

L1_007_365G1_scaffold_576_41
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38280..38519)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L949_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC09389.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L1_007_365G1_scaffold_576_42
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39085..39891)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IR87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE54209.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
L1_007_365G1_scaffold_576_43
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40270..40593
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80025.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
helix-turn-helix domain-containing protein
L1_007_365G1_scaffold_576_44
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40594..41868)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9M7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80024.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_007_365G1_scaffold_576_45
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41869..42585)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NA83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80023.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Response regulator of the LytR/AlgR family
L1_007_365G1_scaffold_576_46
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42590..42928)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NJ44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80022.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
helix-turn-helix domain-containing protein
L1_007_365G1_scaffold_576_47
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43098..43277
DNA (180bp) protein (60aa)
Cyclic lactone autoinducer peptide n=1 Tax=Dorea sp. 5-2 RepID=R9NAM4_9FIRM
Cyclic lactone autoinducer peptide {ECO:0000313|EMBL:EOS80021.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L1_007_365G1_scaffold_576_48
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43282..43863
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80020.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L1_007_365G1_scaffold_576_49
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44177..44551
DNA (375bp) protein (125aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBS7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGG82388.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA-directed RNA polymerase specialized sigma subunit
L1_007_365G1_scaffold_576_50
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45494..45700)
DNA (207bp) protein (69aa)
Predicted transcriptional regulators n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRQ7_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL40482.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_576_51
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45714..46049)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31945.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_365G1_scaffold_576_52
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46392..47027)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XHR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19153.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted transcriptional regulator
L1_007_365G1_scaffold_576_53
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47003..47455)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD45 RepID=T2Y124_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE59271.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Displaying items 31-53 of 53 in total

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