ggKbase home page

L1_007_365G1_scaffold_73_22

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 22188..22682

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigV n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0ME22_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 323
  • Evalue 6.30e-86
RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EDR98192.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 323
  • Evalue 8.80e-86
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 165.0
  • Bit_score: 158
  • Evalue 9.90e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaerostipes caccae → Anaerostipes → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
ATGAAAAAGACACAGAAGATGGAAGATCTGACAGCCGGTATCATTCTCGATGAATATGAAAGCCTGTACCGCATGGCCTATACTTATGTCCGCAATGAAAGCGACGCCATGGATATCGTTCAGGAAAGCGCATATAAAGCGATCACCAAATGTCAGACGGTAAAGCCCCGGTATCTGAAAACCTGGATTTACCGGATTACCATCAACACGGCCATTGATCTGATCAGAAAAAATAAGAAGGAAGTCATCGGAATCGAAGACTACGAATACGGTGCCGAGGATTCCTACCAGGATTTTGATACGCTGGACGCATTAAATGTATTGAGTCCCAGGGAAAAGCAGGTCATCGTCCTCCGTTTCTTCGAGGACATGAAGCTTGCTGAAATCGCTGAGATACTAAACGAAAACTTAAACTCAGTAAAATCAGTGCTTTACCGCAGTCTCAAAAAATTAAAAACCGAACTGACAGAAGGAGAAGAACATTATGAACAATAA
PROTEIN sequence
Length: 165
MKKTQKMEDLTAGIILDEYESLYRMAYTYVRNESDAMDIVQESAYKAITKCQTVKPRYLKTWIYRITINTAIDLIRKNKKEVIGIEDYEYGAEDSYQDFDTLDALNVLSPREKQVIVLRFFEDMKLAEIAEILNENLNSVKSVLYRSLKKLKTELTEGEEHYEQ*