ggKbase home page

L1_007_365G1_scaffold_450_35

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(36909..37781)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 288.0
  • Bit_score: 557
  • Evalue 8.40e-156
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 288.0
  • Bit_score: 554
  • Evalue 1.40e-155
Shikimate dehydrogenase n=2 Tax=Clostridiales RepID=R7DDB6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 288.0
  • Bit_score: 557
  • Evalue 6.00e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus obeum CAG:39 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 873
ATGTCAAAACACATCACAGGACACACCGGATTATTATGTTTACTCGGAAGCCCGGTTGCACACAGTGTTTCTCCGGAAATGCACAACGAAGCATGCGACCAGCTCGGCCTTGATTATAGCTACCTTGCCTTTGATGTACCGGAAGACAAAATGCCGCAGGCAGTCGAAGGACTCCGCACCATGGGTGCAAGAGGCTGGAATATCACCATGCCTGGCAAAAATATCATGTGCAAATTGGCAGACAAGGTTTCTCCTGCTTCGGAGATCTCCGGCGCATGTAATACCATCGTCAACGACAACGGCGTTCTCACCGCTTACACCACCGACGGTGTCGGCTTCATGAGAGCAGTTGCAGAAAACGGCGTAGACATCATCGGCAAAAAGATGACTCTGCTCGGTGCCGGCGGCGCTGCTACTGCAATCCTGGTACAGGCAGCCCTCGACGGCGTGGCTGAGATCAATGTATTCAACGTCAGAGACAATTTCTTCGGAAGAGCCGAGGAAATCGTTGCAAAACTCAATGAGCGTACTTCCTGCAAGGTTACCCTGCACGACTTCTCCGATCCGGAAGTCCTTCGCGCATCCATCGCAGACAGCGCCATTCTTGTCAACGGAACTTCCGTCGGAATGGCTCCAAAAACCGAAAACACCATCATCACCGACACAACGATGTTCCACAAAGACCTCTTCGTTTTCGATGTGATCTACAATCCGCAGGAAACCCGCCTGCTGCGTGAGGCAAAAGAGGCTGGATGCAAGACCGGAAACGGTATGTACATGCTGTTATACCAGGGAGCTGCTTCCTTCAAACTGTGGACTGGCGAGGATATGCCGGTTGAGATCATCAAAGAGAAATACTTCTCCGGAAAATAA
PROTEIN sequence
Length: 291
MSKHITGHTGLLCLLGSPVAHSVSPEMHNEACDQLGLDYSYLAFDVPEDKMPQAVEGLRTMGARGWNITMPGKNIMCKLADKVSPASEISGACNTIVNDNGVLTAYTTDGVGFMRAVAENGVDIIGKKMTLLGAGGAATAILVQAALDGVAEINVFNVRDNFFGRAEEIVAKLNERTSCKVTLHDFSDPEVLRASIADSAILVNGTSVGMAPKTENTIITDTTMFHKDLFVFDVIYNPQETRLLREAKEAGCKTGNGMYMLLYQGAASFKLWTGEDMPVEIIKEKYFSGK*