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L1_007_365G1_scaffold_560_26

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(34402..35571)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITQ4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 391.0
  • Bit_score: 629
  • Evalue 1.70e-177
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 391.0
  • Bit_score: 629
  • Evalue 2.30e-177
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 385.0
  • Bit_score: 411
  • Evalue 2.00e-112

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Taxonomy

Clostridium sp. CAG:7 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1170
ATGGCTCAGGCAGGGACCAACGGAGGCCGGCTGGAGATGACGCAGGTACTGGACTGCTTTGCCCAGGATGCGGTAACGCCTGAGGAGATGGAGGAGGTTTACGCCAGACTGGAAAAGCGGGGAATTCAGGTTCTTTCGGATGAGGGCGCAGAGACTCCGGGAGATGAGGGACTGCTTTTGGAGGATGAGGATGATTCAGATGAGGCAGTATCTGACCTGATTGGCAGCAGATACCGCTGGAATCGTGATTCCTCTGAAGATGAGGACGAGGACTTTTCTCCTTCTTCCGACGAGGGTGAGGACGAGGAAAATGCGCTGCATGAGCAGCTTCTGGAAGGCGTTGCCAGTACAGACCCCATCCGGGAGTATTTAAAAGAGATCGGTTCCATTCCCCTGCTGACGCAGGAACAGGAGCAGGAGCTGGCAAAACGAAAGGCAGAGGGGGATACTCTTGCAGGACAGAAACTGGTGGAAGCCAATCTACGGCTGGTAGTCAGTATTGCAAAACGGTATACGGGACGGGGCATGAGCTTTTTGGATCTGGTTCAGGAGGGTAATATCGGCCTTATGAAGGCAGTGGAGAAGTTTGACTACGCAAAGGGCTATCGTCTGAGTACCTATGCTACCTGGTGGGTTAAGCAGTCGGTCACCCGCGCCCTGGCTGACCAGTCCCGCACCATCCGGCTTCCAGTTCATATGGTAGAGGCAGTGAACCGGGTGCGCAGAGCCCAGCGGGCGCTGGCTGTGCGTCTGGGCAGAGAGCCTTCCAATGAGGAGATTGGAAAAGAAGTGGGAATGTCGGAAAAGAGAGTCACAGAACTGATGCAGTCCTCCGGCGATACTGTATCCCTGGAAACGCCTGTAGGGGATGAGGACGGTTCTAATCTGGGAGACTTTGTAGCCGATGATGCCAACGCATCCACCGAGGAAAAGGCAGAAAGCGTATTTTTAAGGGAAGAGATTGATCAGATGCTTCAGGGATTAAACCCAAGGGAGCGGGAGGTGATCGTTCTTCGTTTCGGTCTGGAAACGGGTCATCCCATGACATTAGAGGAGGTGGGAAAGCGCTTTAAGGTCACTCGCGAGCGCATCCGCCAGATCGAGACTGCGGCGCTGAGAAAACTGAGAAATCCTTCCAGAAGCAGGAAGATACGGGATTTTCTGCCGTAG
PROTEIN sequence
Length: 390
MAQAGTNGGRLEMTQVLDCFAQDAVTPEEMEEVYARLEKRGIQVLSDEGAETPGDEGLLLEDEDDSDEAVSDLIGSRYRWNRDSSEDEDEDFSPSSDEGEDEENALHEQLLEGVASTDPIREYLKEIGSIPLLTQEQEQELAKRKAEGDTLAGQKLVEANLRLVVSIAKRYTGRGMSFLDLVQEGNIGLMKAVEKFDYAKGYRLSTYATWWVKQSVTRALADQSRTIRLPVHMVEAVNRVRRAQRALAVRLGREPSNEEIGKEVGMSEKRVTELMQSSGDTVSLETPVGDEDGSNLGDFVADDANASTEEKAESVFLREEIDQMLQGLNPREREVIVLRFGLETGHPMTLEEVGKRFKVTRERIRQIETAALRKLRNPSRSRKIRDFLP*