ggKbase home page

L1_007_365G1_scaffold_14863_2

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: 1023..1217

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IDJ0_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 58.0
  • Bit_score: 78
  • Evalue 1.80e-12
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFM09645.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 58.0
  • Bit_score: 78
  • Evalue 2.60e-12
sigV; DNA-directed RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 59.0
  • Bit_score: 71
  • Evalue 6.30e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paenibacillus curdlanolyticus → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 195
TTGCACGCGTTAGCTTGTAATATTGAAAATCTCGTTAACAAGTATGGCGATACAGTTTACAGACTTGCGTTTTCATATATGAAAAGCAAGCAGGACGCCGAAGATGTTTCTCAGGATGTATTTATAAAATTATTCGAATATAACGGGAAATTTGAAAATGAAAAACATGAAAAACTTTGGATAATGAGAGTGACG
PROTEIN sequence
Length: 65
LHALACNIENLVNKYGDTVYRLAFSYMKSKQDAEDVSQDVFIKLFEYNGKFENEKHEKLWIMRVT