ggKbase home page

L1_007_365G1_scaffold_20102_2

Organism: L1_007_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(469..1560)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1261057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7275.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 391.0
  • Bit_score: 558
  • Evalue 4.70e-156
Thiamine biosynthesis protein ThiC n=1 Tax=Gardnerella vaginalis JCP7275 RepID=S4H1R5_GARVA similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 391.0
  • Bit_score: 558
  • Evalue 3.40e-156
thiC; thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 391.0
  • Bit_score: 557
  • Evalue 2.10e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gardnerella vaginalis → Gardnerella → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ACCACCCGTGAGTGGATTCTTCGCAACTCCCCCGTGCCGATCGGCACCGTGCCGATGTACCAGGCCCTCGAAAAGGTCGAGGATGATGCCTCCAAGCTGAGCTGGGAACTGTTCCGCGACACCGTGATCGAACAGTGCGAGCAAGGTGTGGATTACATGACCATCCACGCCGGCGTGCTGCTGCGTTACGTGCCGCTGACCGCCAACCGCGTGACCGGCATCGTCTCCCGCGGTGGCTCCATCATGGCCGACTGGTGCCTGCGCCACCACCAGGAGAGCTTCCTGTACACGCACTTCGACGAGCTGTGCGACATCTTCGCCAAGTACGACGTGGCGTTCTCTCTGGGCGATGGGGCCAAGGACGTGCAGGTGATGATCGAGGGCCCGGGCCACGTGCCGTTCGACACCGTGCGCATGAACATCGAGCTGGAGAAGGCCGTGTGCCACAACGCCCCGTTCTACACCCTCGGACCGCTGACCACCGATACCGCTCCGGGTTACGATCACATCACCTCCGCTATCGGCGCCACCGAGATCGGTCGTTACGGCACCGCTATGCTGTGCTACGTGACCCCGAAGGAACACCTCGGCCTGCCGAACAAGGATGATGTGAAGCAGGGCGTGATTGCCTACAAGATCGCCTGCCACGCCGCAGACATCGCCAAGCACCACCCGCACGCGATGGATCGCGACAATGCGATTTCCAAGGCTCGCTTCGAGTTCCGTTGGCTCGACCAGTTCAATCTGTCCTACGATCCGGACACCGCCATCGCCTTCCACGACGATACCCTGCCCGCCGAGCCGGCCAAGATGGCGCACTTCTGCTCGATGTGCGGCCCGAAGTTCTGCTCGATGGCCATCTCCCAGAACATCCGCAAGGCATTCGGTGGCGAGGCCGCTCAGCAGCAAATCGTGAAGGAGGCTGCTGCAGGCATCGACTCCGAGGCACTGGCTACGGCCAAGGCCAATGTCGATAACGGCGTGGTGTCCGCCAACGTGCTCAGCCCCGAAGAAATCCTCGCCGGCATGGATGCGATGAGCGAAAAGTACACCGCCCAGGGCGGCAAGCTCTACTCCACCGCCCAGGAGTGA
PROTEIN sequence
Length: 364
TTREWILRNSPVPIGTVPMYQALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTIHAGVLLRYVPLTANRVTGIVSRGGSIMADWCLRHHQESFLYTHFDELCDIFAKYDVAFSLGDGAKDVQVMIEGPGHVPFDTVRMNIELEKAVCHNAPFYTLGPLTTDTAPGYDHITSAIGATEIGRYGTAMLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADIAKHHPHAMDRDNAISKARFEFRWLDQFNLSYDPDTAIAFHDDTLPAEPAKMAHFCSMCGPKFCSMAISQNIRKAFGGEAAQQQIVKEAAAGIDSEALATAKANVDNGVVSANVLSPEEILAGMDAMSEKYTAQGGKLYSTAQE*