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L1_007_365G1_scaffold_56

Search features with annotation key words

Displaying items 91-120 of 300 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_56_91
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99488..100159)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05055.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_56_92
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100161..101297)
DNA (1137bp) protein (379aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KT98_9FIRM
UDP-galactopyranose mutase {ECO:0000313|EMBL:EGN37593.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_56_93
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101361..104537)
DNA (3177bp) protein (1059aa)
Exonuclease SbcCD, C subunit n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH6_CLOSV
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EDS05053.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
SMC domain-containing protein
L1_007_365G1_scaffold_56_94
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104534..105694)
DNA (1161bp) protein (387aa)
Exonuclease SbcCD, D subunit n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH5_CLOSV
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EDS05052.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
exonuclease SbcD
L1_007_365G1_scaffold_56_95
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105864..106112)
DNA (249bp) protein (83aa)
Phosphocarrier protein PtsH n=1 Tax=Clostridium sp. CAG:510 RepID=R6CBF4_9CLOT
Phosphocarrier protein PtsH {ECO:0000313|EMBL:CDA68836.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
Phosphotransferase System HPr (HPr) Family
L1_007_365G1_scaffold_56_96
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106126..107535)
DNA (1410bp) protein (470aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY8_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EES75792.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_56_97
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(107551..109470)
DNA (1920bp) protein (640aa)
PTS system glucose subfamily IIA component n=1 Tax=Clostridium sp. CAG:590 RepID=R5E845_9CLOT
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CCX88760.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12)
L1_007_365G1_scaffold_56_98
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(109661..110641)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R0E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43196.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
LacI family transcriptional regulator
L1_007_365G1_scaffold_56_99
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110685..112088)
DNA (1404bp) protein (468aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37597.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
phospholipase D
L1_007_365G1_scaffold_56_100
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(112109..112687)
DNA (579bp) protein (193aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH3_CLOSV
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:EDS05050.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
phosphatidylglycerophosphate synthase
L1_007_365G1_scaffold_56_101
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(112684..113517)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MKU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71418.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_007_365G1_scaffold_56_102
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113812..114528)
DNA (717bp) protein (239aa)
Transcriptional regulator, GntR family id=4400572 bin=GWC2_Clostridiales_40_7 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEE95389.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L1_007_365G1_scaffold_56_103
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(114608..115432)
DNA (825bp) protein (275aa)
Glucokinase {ECO:0000313|EMBL:AEI51065.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEI51065.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Glucokinase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQ55_RUNSL
glucokinase
L1_007_365G1_scaffold_56_104
unknown

Not on your lists

comp(115433..116482)
DNA (1050bp) protein (350aa)

This feature has no annotations

L1_007_365G1_scaffold_56_105
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116482..117306)
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=5 Tax=Clostridiales RepID=A5KLU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26636.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
binding-protein-dependent transporters inner membrane component
L1_007_365G1_scaffold_56_106
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(117310..118230)
DNA (921bp) protein (307aa)
ABC transporter, permease protein n=5 Tax=Clostridiales RepID=A5KLU6_9FIRM
binding-protein-dependent transporters inner membrane component
Tax=RBG_16_Actinobacteria_68_12_curated
L1_007_365G1_scaffold_56_107
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(118251..119426)
DNA (1176bp) protein (392aa)
Extracellular solute-binding protein family 1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F739_CONWI
extracellular solute-binding protein
Tax=RBG_16_Chloroflexi_52_11_curated
L1_007_365G1_scaffold_56_108
unknown

Not on your lists

comp(119434..119601)
DNA (168bp) protein (56aa)

This feature has no annotations

L1_007_365G1_scaffold_56_109
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(119706..121151)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05048.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_365G1_scaffold_56_110
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(121380..122144)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BX73_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPZ45419.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
Beta-lactamase-like
L1_007_365G1_scaffold_56_111
Staphylococcus pettenkoferi, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(122160..123086)
DNA (927bp) protein (309aa)
Lactonase Drp35 {ECO:0000313|EMBL:EHM67113.1}; EC=3.1.1.- {ECO:0000313|EMBL:EHM67113.1};; TaxID=904314 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pettenkoferi VCU012.;"
Lactonase Drp35 n=1 Tax=Staphylococcus pettenkoferi VCU012 RepID=H0DJS8_9STAP
Lactonase drp35
L1_007_365G1_scaffold_56_112
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123088..124338)
DNA (1251bp) protein (417aa)
Transporter, major facilitator family protein n=2 Tax=Oscillibacter RepID=U2SH64_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK64853.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
oxlT; MFS oxalate/formate antiporter
L1_007_365G1_scaffold_56_113
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124370..126391)
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NG01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB89010.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
NADH:flavin oxidoreductase
L1_007_365G1_scaffold_56_114
Bacillus ginsengihumi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(126413..127600)
DNA (1188bp) protein (396aa)
1,3-propanediol dehydrogenase (EC:1.1.1.202)
Iron-containing alcohol dehydrogenase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XHF1_9RALS
Alcohol dehydrogenase {ECO:0000313|EMBL:KHD86249.1}; TaxID=363870 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus ginsengihumi.;"
L1_007_365G1_scaffold_56_115
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127622..128779)
DNA (1158bp) protein (386aa)
Alcohol dehydrogenase n=1 Tax=Geobacillus sp. JF8 RepID=S5YZZ1_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KJF27384.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
alcohol dehydrogenase
L1_007_365G1_scaffold_56_116
unknown

Not on your lists

comp(128793..129896)
DNA (1104bp) protein (368aa)

This feature has no annotations

L1_007_365G1_scaffold_56_117
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

130204..131349
DNA (1146bp) protein (382aa)
Transcriptional regulator, LuxR family n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YLA8_ANEAE
Strain NCTC 7096 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIV58870.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
LuxR family transcriptional regulator
L1_007_365G1_scaffold_56_118
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131479..132669
DNA (1191bp) protein (397aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XHF1_9RALS
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EON18748.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
alcohol dehydrogenase, class IV
L1_007_365G1_scaffold_56_119
unknown

Not on your lists

132683..132823
DNA (141bp) protein (47aa)

This feature has no annotations

L1_007_365G1_scaffold_56_120
Bacillus sp. JCM 19046, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

132866..134326
DNA (1461bp) protein (487aa)
Na+/solute symporter n=1 Tax=Lentibacillus jeotgali RepID=UPI000262745F
Uncharacterized protein {ECO:0000313|EMBL:GAF19563.1}; TaxID=1460640 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19046.;"
PutP-like proline/sodium symporter
Displaying items 91-120 of 300 in total

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