ggKbase home page

L1_008_000G1_scaffold_11

Search features with annotation key words

Displaying items 121-150 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_11_121
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122687..122851
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I4K2A1_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_122
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122901..124025)
DNA (1125bp) protein (375aa)
rlmG; ribosomal RNA large subunit methyltransferase G (EC:2.1.1.174)
Ribosomal RNA large subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036146}; EC=2.1.1.174 {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036145};; 23S rRNA m2G1835 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01859}; rRNA (guanine-N(2)-)-methyltransferase RlmG {ECO:0000256|HAMAP-Rule:MF_01859}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Ribosomal RNA large subunit methyltransferase G n=3 Tax=Pseudomonas RepID=I2BW34_PSEFL
L1_008_000G1_scaffold_11_123
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124165..124875)
DNA (711bp) protein (237aa)
Autoinducer-binding transcriptional regulator, LuxR family n=2 Tax=Pseudomonas RepID=I2BXQ8_PSEFL
autoinducer-binding transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ59041.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_124
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125312..126088
DNA (777bp) protein (259aa)
fpr_1; ferredoxin--NADP reductase (EC:1.18.1.2)
Fpr_1 protein {ECO:0000313|EMBL:AFJ59625.1}; EC=1.18.1.2 {ECO:0000313|EMBL:AFJ59625.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Ferredoxin--NADP reductase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H848_9PSED
L1_008_000G1_scaffold_11_125
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126130..126546)
DNA (417bp) protein (139aa)
Large-conductance mechanosensitive channel n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BKQ4_PSEFL
mscL; large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_126
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126834..128375
DNA (1542bp) protein (514aa)
katB; catalase KatB (EC:1.11.1.6)
Catalase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KHL8_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_127
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128433..128972
DNA (540bp) protein (180aa)
Ankyrin repeat protein n=3 Tax=Pseudomonas RepID=I2BKD7_PSEFL
ankyrin
Uncharacterized protein {ECO:0000313|EMBL:AFJ54720.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_128
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129008..130375
DNA (1368bp) protein (456aa)
DNA repair protein radA n=2 Tax=Pseudomonas RepID=I4K656_PSEFL
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
radA; DNA repair protein RadA
L1_008_000G1_scaffold_11_129
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130504..130872)
DNA (369bp) protein (123aa)
Cyclic diguanosine monophosphate-binding protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J6R2_9PSED
type IV pilus assembly protein, PilZ family
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_130
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131047..133113
DNA (2067bp) protein (689aa)
Carbon starvation protein CstA n=2 Tax=Pseudomonas RepID=I2BLJ7_PSEFL
cstA; carbon starvation protein CstA
CstA protein {ECO:0000313|EMBL:AFJ55130.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_131
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133129..133326
DNA (198bp) protein (66aa)
Uncharacterized protein n=6 Tax=Pseudomonas RepID=I2BWB4_PSEFL
putative small protein yjiX
Uncharacterized protein {ECO:0000313|EMBL:EIK71882.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_11_132
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133510..134466
DNA (957bp) protein (319aa)
GTP-binding protein, YjiA family n=3 Tax=Pseudomonas RepID=I2BYM3_PSEFL
yjiA; GTP-binding protein, YjiA family
YjiA protein {ECO:0000313|EMBL:AFJ59356.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_133
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134656..135909)
DNA (1254bp) protein (418aa)
glyA_1; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Serine hydroxymethyltransferase n=4 Tax=Pseudomonas RepID=I2BLN5_PSEFL
L1_008_000G1_scaffold_11_134
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136141..139992)
DNA (3852bp) protein (1284aa)
Developmental regulator MorA n=2 Tax=Pseudomonas RepID=I2BNQ6_PSEFL
MorA protein {ECO:0000313|EMBL:AFJ55889.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
morA; developmental regulator MorA
L1_008_000G1_scaffold_11_135
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140278..141942
DNA (1665bp) protein (555aa)
ATP-binding cassette protein, ChvD family n=3 Tax=Pseudomonas RepID=I2BQ09_PSEFL
ChvD family ATP-binding protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_136
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142009..142938)
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BS77_PSEFL
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AFJ57110.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_137
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143034..144227
DNA (1194bp) protein (398aa)
Major facilitator superfamily protein superfamily n=1 Tax=Pseudomonas sp. CF150 RepID=S6JBY5_9PSED
major facilitator family transporter
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_138
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144262..145086
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6H2N3_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_139
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145119..146336
DNA (1218bp) protein (406aa)
Major facilitator family protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H831_9PSED
major facilitator family transporter
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_140
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146376..147605
DNA (1230bp) protein (410aa)
Aminotransferase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BS78_PSEFL
aminotransferase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_141
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147630..148475
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BVC5_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58208.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_142
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148524..149414
DNA (891bp) protein (297aa)
aepX; phosphoenolpyruvate phosphomutase (EC:5.4.2.9)
Putative phosphonopyruvate hydrolase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JBZ0_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_143
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149761..151098
DNA (1338bp) protein (446aa)
gdhA; NADP-specific glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J405_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_144
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151095..151592)
DNA (498bp) protein (166aa)
GreA/GreB family elongation factor, putative n=2 Tax=Pseudomonas RepID=I2BLH1_PSEFL
GreA/GreB family elongation factor
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_145
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151746..152102)
DNA (357bp) protein (119aa)
Putative lipoprotein n=2 Tax=Pseudomonas RepID=S6IDS3_9PSED
lipoprotein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_146
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152300..154153)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6H2M7_9PSED
putative outermembrane protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_147
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154246..154734)
DNA (489bp) protein (163aa)
Uncharacterized protein n=5 Tax=Pseudomonas RepID=I2BUQ4_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK72440.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_11_148
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154998..157436
DNA (2439bp) protein (813aa)
Putative ATP-dependent protease n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KH43_PSEFL
Putative ATP-dependent protease {ECO:0000313|EMBL:EIK64033.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
ATP-dependent protease
L1_008_000G1_scaffold_11_149
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157751..158068
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I4KCU2_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_150
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158128..159951)
DNA (1824bp) protein (608aa)
Putative lipoprotein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KRF3_9PSED
lipoprotein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 121-150 of 250 in total

View Taxonomy