ggKbase home page

L1_008_000G1_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 298 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_19_1
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(726..1517)
DNA (792bp) protein (264aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Anaerostipes RepID=E5VUE6_9FIRM
L1_008_000G1_scaffold_19_2
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1534..2556)
DNA (1023bp) protein (341aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Anaerostipes RepID=B0MI58_9FIRM
L1_008_000G1_scaffold_19_3
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2567..3478)
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=2 Tax=Anaerostipes RepID=E5VUE8_9FIRM
L1_008_000G1_scaffold_19_4
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3493..4155)
DNA (663bp) protein (221aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QLM6_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDC36670.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
ribosomal-protein-alanine acetyltransferase
L1_008_000G1_scaffold_19_5
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4178..4906)
DNA (729bp) protein (243aa)
Universal bacterial protein YeaZ n=3 Tax=Anaerostipes RepID=B0MH35_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EDR96649.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L1_008_000G1_scaffold_19_6
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4907..5329)
DNA (423bp) protein (141aa)
Hydrolase, P-loop family n=3 Tax=Anaerostipes RepID=B0MH34_9FIRM
Hydrolase, P-loop family {ECO:0000313|EMBL:EDR96648.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
conserved hypothetical nucleotide-binding protein
L1_008_000G1_scaffold_19_7
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5331..5840)
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MH33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36677.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_8
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5998..6540
DNA (543bp) protein (181aa)
Stage V sporulation protein T n=3 Tax=Anaerostipes RepID=E5VUF3_9FIRM
Stage V sporulation protein T {ECO:0000313|EMBL:CDC36680.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
transcriptional regulator, AbrB family
L1_008_000G1_scaffold_19_9
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6600..9425)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=2 Tax=Anaerostipes RepID=B0MH31_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
excinuclease ABC, A subunit
L1_008_000G1_scaffold_19_10
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9435..11420)
DNA (1986bp) protein (662aa)
UvrABC system protein B n=3 Tax=Anaerostipes RepID=B0MH30_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
excinuclease ABC, B subunit
L1_008_000G1_scaffold_19_11
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11788..13746)
DNA (1959bp) protein (653aa)
PAS domain S-box protein n=2 Tax=Anaerostipes RepID=B0MH28_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:CDC36689.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_12
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13780..14949)
DNA (1170bp) protein (390aa)
PAS domain S-box protein n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6R0Q2_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:CDC36691.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_13
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15168..17597)
DNA (2430bp) protein (810aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH26_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDR96640.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L1_008_000G1_scaffold_19_14
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17626..19011)
DNA (1386bp) protein (462aa)
GntR family bacterial regulatory protein n=2 Tax=Anaerostipes RepID=E5VUF8_9FIRM
GntR family bacterial regulatory protein {ECO:0000313|EMBL:CDC36728.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_15
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19195..20019)
DNA (825bp) protein (275aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=3 Tax=Anaerostipes RepID=B0MH23_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDC36730.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_16
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20052..21242)
DNA (1191bp) protein (397aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Peptidase S41 family n=2 Tax=Anaerostipes RepID=R6R0U0_9FIRM
Peptidase S41 family {ECO:0000313|EMBL:CDC36731.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L1_008_000G1_scaffold_19_17
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21412..22824)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=2 Tax=Anaerostipes RepID=R6RQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36732.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_18
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22972..24288)
DNA (1317bp) protein (439aa)
Citrate transporter n=3 Tax=Anaerostipes RepID=B0MH21_9FIRM
Citrate transporter {ECO:0000313|EMBL:CDC36733.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_19
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24290..25858)
DNA (1569bp) protein (523aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Acetate CoA-transferase YdiF n=2 Tax=Anaerostipes RepID=E5VUG4_9FIRM
coenzyme A transferase
L1_008_000G1_scaffold_19_20
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25846..26286)
DNA (441bp) protein (147aa)
MaoC-like protein n=3 Tax=Anaerostipes RepID=B0MH19_9FIRM
MaoC domain-containing protein {ECO:0000313|EMBL:CDC36735.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
enoyl-CoA hydratase
L1_008_000G1_scaffold_19_21
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26455..27342)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=3 Tax=Anaerostipes RepID=B0MH18_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDC36736.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Transcriptional regulator
L1_008_000G1_scaffold_19_22
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27455..28663)
DNA (1209bp) protein (403aa)
Peptidase family M23 n=2 Tax=Anaerostipes RepID=E5VUG7_9FIRM
Peptidase family M23 {ECO:0000313|EMBL:CDC36737.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Membrane proteins related to metalloendopeptidases
L1_008_000G1_scaffold_19_23
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28674..29582)
DNA (909bp) protein (303aa)
Cell division protein FtsX n=3 Tax=Anaerostipes RepID=B0MH16_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
cell division protein FtsX
L1_008_000G1_scaffold_19_24
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29572..30252)
DNA (681bp) protein (227aa)
Cell division ATP-binding protein FtsE n=3 Tax=Anaerostipes RepID=B0MH15_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDC36739.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
cell division ATP-binding protein FtsE
L1_008_000G1_scaffold_19_25
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30277..31362)
DNA (1086bp) protein (362aa)
Carbohydrate diacid regulator n=2 Tax=Anaerostipes RepID=E5VUH0_9FIRM
Carbohydrate diacid regulator {ECO:0000313|EMBL:EFV22349.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
transcriptional regulator, CdaR family
L1_008_000G1_scaffold_19_26
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31453..32286)
DNA (834bp) protein (278aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=R6R0U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36741.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L1_008_000G1_scaffold_19_27
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32358..33620)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MH11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36742.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Transcriptional regulator
L1_008_000G1_scaffold_19_28
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33736..34458
DNA (723bp) protein (241aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Short chain dehydrogenase n=2 Tax=Anaerostipes RepID=E5VUH3_9FIRM
Short chain dehydrogenase {ECO:0000313|EMBL:CDC36743.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L1_008_000G1_scaffold_19_29
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34460..36601)
DNA (2142bp) protein (714aa)
Tex-like protein N-terminal domain protein n=2 Tax=Anaerostipes RepID=R6QUR2_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDC36744.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Transcriptional accessory protein
L1_008_000G1_scaffold_19_30
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36614..37093)
DNA (480bp) protein (160aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding protein n=2 Tax=Anaerostipes RepID=E5VUH6_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding protein {ECO:0000313|EMBL:CDC36745.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Displaying items 1-30 of 298 in total

View Taxonomy