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L1_008_000G1_scaffold_25

Search features with annotation key words

Displaying items 121-150 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_25_121
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118774..119403)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uracil phosphoribosyltransferase n=2 Tax=Clostridium RepID=B6FQ54_9CLOT
uracil phosphoribosyltransferase
L1_008_000G1_scaffold_25_122
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(119428..119853)
DNA (426bp) protein (142aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QNZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23662.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L1_008_000G1_scaffold_25_123
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(119850..121433)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23661.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Sua5/YciO/YrdC/YwlC family protein
L1_008_000G1_scaffold_25_124
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(121403..122080)
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PJE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23660.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cell wall hydrolase/autolysin
L1_008_000G1_scaffold_25_125
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122155..124026)
DNA (1872bp) protein (624aa)
Glycosyl hydrolase, family 18 n=2 Tax=Clostridium RepID=B6FQ58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23659.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted glycosyl hydrolase
L1_008_000G1_scaffold_25_126
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124151..124366)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23658.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_127
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

124972..125709
DNA (738bp) protein (246aa)
Negative regulator of genetic competence (MecA) n=2 Tax=Clostridium RepID=B6FQ61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23657.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Negative regulator of genetic competence, sporulation and motility
L1_008_000G1_scaffold_25_128
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125753..125956)
DNA (204bp) protein (68aa)
Hydrid cluster protein-associated redox disulfide domain protein n=2 Tax=Clostridium RepID=B6FQ62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23656.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Domain of unknown function (DUF1858).
L1_008_000G1_scaffold_25_129
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126406..127344)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23655.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_008_000G1_scaffold_25_130
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

127551..127940
DNA (390bp) protein (130aa)
Transcriptional regulator, Fur family n=2 Tax=Clostridium RepID=B6FQ64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23654.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Fe2+/Zn2+ uptake regulation proteins
L1_008_000G1_scaffold_25_131
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

128051..128593
DNA (543bp) protein (181aa)
Rubredoxin n=2 Tax=Clostridium RepID=B6FQ65_9CLOT
Rubredoxin {ECO:0000313|EMBL:EEA81844.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Rubrerythrin
L1_008_000G1_scaffold_25_132
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128658..130709)
DNA (2052bp) protein (684aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QNY1_9CLOT
L1_008_000G1_scaffold_25_133
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130755..134111)
DNA (3357bp) protein (1119aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23651.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
alkaline phosphatase-like protein
L1_008_000G1_scaffold_25_134
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134485..135051)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23650.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted membrane protein
L1_008_000G1_scaffold_25_135
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135054..135656)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81809.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_25_136
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135757..137349)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PH13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23648.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Superfamily II DNA and RNA helicases
L1_008_000G1_scaffold_25_137
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

137642..138295
DNA (654bp) protein (218aa)
Channel protein, hemolysin III family n=2 Tax=Clostridium RepID=B6FQ73_9CLOT
Channel protein, hemolysin III family {ECO:0000313|EMBL:EEA81811.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
channel protein, hemolysin III family
L1_008_000G1_scaffold_25_138
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138341..139243)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23646.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_139
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(139256..140635)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23645.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_25_140
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(140648..141514)
DNA (867bp) protein (289aa)
ABC-2 type transporter n=2 Tax=Clostridium RepID=B6FQ76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23644.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_141
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(141498..142448)
DNA (951bp) protein (317aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ77_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA81815.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase component
L1_008_000G1_scaffold_25_142
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(142574..143314)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81816.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_25_143
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143380..143772)
DNA (393bp) protein (131aa)
GIY-YIG catalytic domain protein n=2 Tax=Clostridium RepID=B6FQ79_9CLOT
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EEA81817.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted endonuclease containing a URI domain
L1_008_000G1_scaffold_25_144
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(144058..148668)
DNA (4611bp) protein (1537aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23640.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000G1_scaffold_25_145
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149734..150708)
DNA (975bp) protein (325aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B6FQ86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23639.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_25_146
unknown

Not on your lists

comp(150719..150808)
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_000G1_scaffold_25_147
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(151015..151764)
DNA (750bp) protein (250aa)
Peptidase, M23 family n=2 Tax=Clostridium RepID=B6FQ87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22587.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Membrane-bound metallopeptidase
L1_008_000G1_scaffold_25_148
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(151807..152694)
DNA (888bp) protein (296aa)
SpoIID/LytB domain protein n=2 Tax=Clostridium RepID=B6FQ88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22586.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
stage II sporulation protein D
L1_008_000G1_scaffold_25_149
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(152740..157863)
DNA (5124bp) protein (1708aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ89_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA81785.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_008_000G1_scaffold_25_150
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(158109..159551)
DNA (1443bp) protein (481aa)
Divergent AAA domain protein n=2 Tax=Clostridium RepID=B6FQ90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22584.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
divergent AAA domain-containing protein
Displaying items 121-150 of 225 in total

View Taxonomy