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L1_008_000G1_scaffold_52

Search features with annotation key words

Displaying items 31-60 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_52_31
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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34246..35148
DNA (903bp) protein (301aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Pyridoxal biosynthesis lyase PdxS n=3 Tax=Actinomyces RepID=A7BCM7_9ACTO
pdxS; pyridoxine biosynthesis protein
L1_008_000G1_scaffold_52_32
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35142..35735
DNA (594bp) protein (198aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Glutamine amidotransferase subunit PdxT n=1 Tax=Actinomyces sp. ICM39 RepID=J2Z9W4_9ACTO
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit
L1_008_000G1_scaffold_52_33
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35735..36364
DNA (630bp) protein (210aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ruvC; crossover junction endodeoxyribonuclease (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4G7_9ACTO
L1_008_000G1_scaffold_52_34
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36420..37025
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U158_9ACTO
ruvA; Holliday junction DNA helicase RuvA
L1_008_000G1_scaffold_52_35
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37018..38070
DNA (1053bp) protein (351aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZBV4_9ACTO
Holliday junction DNA helicase subunit RuvB
L1_008_000G1_scaffold_52_36
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38249..38656
DNA (408bp) protein (136aa)
Putative preprotein translocase, YajC subunit n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U160_9ACTO
Putative preprotein translocase, YajC subunit {ECO:0000313|EMBL:EFF79158.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
preprotein translocase subunit YajC
L1_008_000G1_scaffold_52_37
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38683..40647
DNA (1965bp) protein (655aa)
Protein translocase subunit SecD n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U161_9ACTO
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
protein-export membrane protein SecD
L1_008_000G1_scaffold_52_38
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40649..41737
DNA (1089bp) protein (363aa)
Protein-export membrane protein SecF n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U162_9ACTO
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
protein translocase subunit secF
L1_008_000G1_scaffold_52_39
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41734..42273
DNA (540bp) protein (180aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Adenine phosphoribosyltransferase n=2 Tax=Actinomyces odontolyticus RepID=A7BCL9_9ACTO
adenine phosphoribosyltransferase
L1_008_000G1_scaffold_52_40
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42367..44652
DNA (2286bp) protein (762aa)
GTP diphosphokinase {ECO:0000313|EMBL:EWC95718.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EWC95718.1};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
GTP diphosphokinase n=1 Tax=Actinomyces sp. ICM39 RepID=J2Z9T6_9ACTO
L1_008_000G1_scaffold_52_41
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44818..46152
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCL7_9ACTO
PF03993 domain protein {ECO:0000313|EMBL:EWC95823.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_52_42
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46154..46873
DNA (720bp) protein (240aa)
Metallo-beta-lactamase domain protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U166_9ACTO
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EWC95767.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
beta-lactamase
L1_008_000G1_scaffold_52_43
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


46901..48253
DNA (1353bp) protein (451aa)
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U167_9ACTO
L1_008_000G1_scaffold_52_44
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48254..49906
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCL4_9ACTO
50S ribosome-binding GTPase {ECO:0000313|EMBL:EWC95637.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
putative ABC transporter
L1_008_000G1_scaffold_52_45
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49903..51492
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCL3_9ACTO
50S ribosome-binding GTPase {ECO:0000313|EMBL:EWC95773.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
GTP-binding protein HSR1-like protein
L1_008_000G1_scaffold_52_46
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51721..53889
DNA (2169bp) protein (723aa)
DEAD/DEAH box helicase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U170_9ACTO
DEAD/DEAH box helicase {ECO:0000313|EMBL:EWC95777.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
DNA helicase
L1_008_000G1_scaffold_52_47
unknown

Not on your lists

54037..54717
DNA (681bp) protein (227aa)

This feature has no annotations

L1_008_000G1_scaffold_52_48
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


54870..57200
DNA (2331bp) protein (777aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EFF79171.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EFF79171.1};; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
aspS; aspartyl-tRNA synthase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Actinomyces odontolyticus RepID=A7BCK9_9ACTO
L1_008_000G1_scaffold_52_49
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57275..57892
DNA (618bp) protein (206aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U174_9ACTO
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EFF79172.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
translation factor Sua5
L1_008_000G1_scaffold_52_50
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57897..59081
DNA (1185bp) protein (395aa)
Putative esterase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCK7_9ACTO
Putative esterase {ECO:0000313|EMBL:EDN80931.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
enterochelin esterase
L1_008_000G1_scaffold_52_51
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59169..60206
DNA (1038bp) protein (346aa)
Periplasmic binding protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U176_9ACTO
Periplasmic binding protein {ECO:0000313|EMBL:EFF79174.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
iron-siderophore binding protein
L1_008_000G1_scaffold_52_52
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60243..61238
DNA (996bp) protein (332aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3EF98_9ACTO
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EWC95629.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
transport system permease
L1_008_000G1_scaffold_52_53
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61235..62284
DNA (1050bp) protein (350aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2Z9V9_9ACTO
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EWC95759.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter permease
L1_008_000G1_scaffold_52_54
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62281..63075
DNA (795bp) protein (265aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4H3_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC95713.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ABC transporter
L1_008_000G1_scaffold_52_55
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

63264..63395
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCK2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN80926.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L1_008_000G1_scaffold_52_56
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

63367..64479
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U181_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95743.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
alpha-mannosidase
L1_008_000G1_scaffold_52_57
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

64622..65998
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCK0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95675.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
polymorphic outer membrane protein
L1_008_000G1_scaffold_52_58
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66009..67352
DNA (1344bp) protein (448aa)
ATPase, AAA family n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4U183_9ACTO
MgsA AAA+ ATPase family protein {ECO:0000313|EMBL:EWC95732.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ATPase AAA
L1_008_000G1_scaffold_52_59
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


67472..68095
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZP52_9ACTO
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
rpsD; 30S ribosomal protein S4
L1_008_000G1_scaffold_52_60
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


68216..70924
DNA (2709bp) protein (903aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Alanine--tRNA ligase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EF94_9ACTO
alanyl-tRNA synthetase
Displaying items 31-60 of 167 in total

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