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L1_008_000G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_122_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(362..2305)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KGY9_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:EIK63979.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
hypothetical protein
L1_008_000G1_scaffold_122_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2573..3130)
DNA (558bp) protein (186aa)
Lipoprotein, putative n=2 Tax=Pseudomonas RepID=I2BLP3_PSEFL
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55176.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3175..3777)
DNA (603bp) protein (201aa)
Lipoprotein, putative n=3 Tax=Pseudomonas RepID=I2BS95_PSEFL
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57128.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3801..4550)
DNA (750bp) protein (250aa)
SmtA protein n=3 Tax=Pseudomonas RepID=I2BRY5_PSEFL
smtA; SmtA protein
SmtA protein {ECO:0000313|EMBL:AFJ57018.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_5
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4543..4851)
DNA (309bp) protein (103aa)
Uncharacterized protein n=5 Tax=Pseudomonas RepID=I2BLP9_PSEFL
hypothetical protein
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EZP66072.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
L1_008_000G1_scaffold_122_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4945..7311)
DNA (2367bp) protein (789aa)
Penicillin-binding protein 1C n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BWX9_PSEFL
pbpC; penicillin-binding protein 1C
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7482..7775
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BWX6_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58759.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7845..12740)
DNA (4896bp) protein (1632aa)
Alpha-2-macroglobulin YfhM n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BYB9_PSEFL
yfhM; alpha-2-macroglobulin YfhM
YfhM protein {ECO:0000313|EMBL:AFJ59252.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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13048..14391
DNA (1344bp) protein (448aa)
DNA-damage-inducible protein F n=1 Tax=Pseudomonas sp. CF150 RepID=S6KDT5_9PSED
MATE efflux family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14504..16417)
DNA (1914bp) protein (638aa)
speA; arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Biosynthetic arginine decarboxylase n=4 Tax=Pseudomonas RepID=I2BV37_PSEFL
L1_008_000G1_scaffold_122_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16560..16931)
DNA (372bp) protein (124aa)
Translation initiation factor Sui1 n=4 Tax=Pseudomonas RepID=S6H3D6_9PSED
yciH; translation initiation factor SUI1
YciH protein {ECO:0000313|EMBL:AFJ57272.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17114..17653)
DNA (540bp) protein (180aa)
Hydrolase, NUDIX family n=3 Tax=Pseudomonas RepID=I2BLC3_PSEFL
NUDIX family hydrolase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17653..18720)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=5 Tax=Pseudomonas RepID=I2BX44_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK62259.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_122_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19019..20689
DNA (1671bp) protein (557aa)
Response regulator/GGDEF domain protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BTA7_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:AFJ57490.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
response regulator/GGDEF domain-containing protein
L1_008_000G1_scaffold_122_15
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20743..22704
DNA (1962bp) protein (654aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J840_9PSED
methyl-accepting chemotaxis protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22997..23452
DNA (456bp) protein (152aa)
aroQ_2; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
3-dehydroquinate dehydratase n=3 Tax=Pseudomonas RepID=I2BVE5_PSEFL
L1_008_000G1_scaffold_122_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23477..23941
DNA (465bp) protein (155aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=3 Tax=Pseudomonas RepID=I2BRU5_PSEFL
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
AccB protein {ECO:0000313|EMBL:AFJ56978.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_18
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23959..25320
DNA (1362bp) protein (454aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EIK69161.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EIK69161.1};; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
Acetyl-CoA carboxylase, biotin carboxylase subunit n=5 Tax=Pseudomonas RepID=I2BLA0_PSEFL
L1_008_000G1_scaffold_122_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25589..26467
DNA (879bp) protein (293aa)
prmA; 50S ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=3 Tax=Pseudomonas RepID=I2BNP8_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26498..27757
DNA (1260bp) protein (420aa)
MJ0042 family finger-like domain protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BNQ8_PSEFL
MJ0042 family finger-like domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27943..28956
DNA (1014bp) protein (338aa)
dusB; tRNA-dihydrouridine synthase B (EC:1.-.-.-)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
tRNA-dihydrouridine synthase n=3 Tax=Pseudomonas RepID=I2BWH3_PSEFL
L1_008_000G1_scaffold_122_22
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28953..29273
DNA (321bp) protein (107aa)
DNA-binding protein Fis n=61 Tax=Pseudomonas RepID=D7I5C3_PSESS
fis; DNA-binding protein Fis
DNA-binding protein Fis {ECO:0000256|SAAS:SAAS00253269}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_122_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29356..30963
DNA (1608bp) protein (536aa)
purH; bifunctional purine biosynthesis protein PurH (EC:3.5.4.10 2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=3 Tax=Pseudomonas RepID=I2BTB7_PSEFL
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31089..32381
DNA (1293bp) protein (431aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Phosphoribosylamine--glycine ligase n=3 Tax=Pseudomonas RepID=I2BSQ0_PSEFL
L1_008_000G1_scaffold_122_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32498..35272
DNA (2775bp) protein (925aa)
Putative sensor kinase/response regulator fusion protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H1V3_9PSED
retS; sensor histidine kinase/response regulator RetS
RetS protein {ECO:0000313|EMBL:AFJ57688.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_122_26
unknown

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35272..35436
DNA (165bp) protein (55aa)

This feature has no annotations

L1_008_000G1_scaffold_122_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35473..36069
DNA (597bp) protein (199aa)
Multiple antibiotic resistance protein n=7 Tax=Pseudomonas RepID=E2XKN4_PSEFL
membrane protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
L1_008_000G1_scaffold_122_28
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36066..36845)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6IMY6_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37082..38719)
DNA (1638bp) protein (546aa)
cobJ; CbiG protein/precorrin-3B C17-methyltransferase (EC:2.1.1.131)
CbiG protein/precorrin-3B C17-methyltransferase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BKZ1_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_122_30
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38719..39450)
DNA (732bp) protein (244aa)
cobI; precorrin-2 C(20)-methyltransferase (EC:2.1.1.130)
CobI protein {ECO:0000313|EMBL:AFJ55280.1}; EC=2.1.1.130 {ECO:0000313|EMBL:AFJ55280.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Precorrin-2 C20-methyltransferase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BLZ7_PSEFL
Displaying items 1-30 of 99 in total

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