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L1_008_000G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 265 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_144_1
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..267)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:EFV37050.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_008_000G1_scaffold_144_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(318..1073)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRZ4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70944.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_008_000G1_scaffold_144_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1070..1276)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAH9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50621.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L1_008_000G1_scaffold_144_4
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1406..2491
DNA (1086bp) protein (362aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29444.1}; Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KFI67214.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KFI67214.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZM1_BIFBR
Peptidyl-prolyl cis-trans isomerase
L1_008_000G1_scaffold_144_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2666..4990)
DNA (2325bp) protein (775aa)
relA1; GTP pyrophosphokinase/Guanosine 3',5'-bis(Diphosphate)3'-pyrophosphohydrolase (EC:2.7.6.5)
RelA1 GTP pyrophosphokinase/Guanosine 3',5'-bis(Diphosphate)3'-pyrophosphohydrolase n=2 Tax=Bifidobacterium dentium RepID=D2QB21_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27326.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_144_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5096..5572)
DNA (477bp) protein (159aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Bifidobacterium dentium RepID=E0Q5R1_9BIFI
L1_008_000G1_scaffold_144_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5572..5865)
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8J1_9BIFI
hypothetical protein
PF13834 domain protein {ECO:0000313|EMBL:ETO96328.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_144_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6017..7036
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41983.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
DNA binding protein
L1_008_000G1_scaffold_144_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7052..8242)
DNA (1191bp) protein (397aa)
Nucleotide pyrophosphatase n=2 Tax=Bifidobacterium dentium RepID=D2QB25_BIFDB
nucleotide pyrophosphatase
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27330.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_144_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8469..11162
DNA (2694bp) protein (898aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
gyrA2; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q6_9BIFI
L1_008_000G1_scaffold_144_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11166..15935)
DNA (4770bp) protein (1590aa)
DEAD/DEAH box helicase n=2 Tax=Bifidobacterium dentium RepID=E1N9L6_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27332.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
lhr; ATP-dependent helicase lhr
L1_008_000G1_scaffold_144_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15932..16156)
DNA (225bp) protein (75aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q4_9BIFI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFM41978.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
XRE family transcriptional regulator
L1_008_000G1_scaffold_144_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16158..16691)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8I4_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27334.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
hypothetical protein
L1_008_000G1_scaffold_144_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16848..18254
DNA (1407bp) protein (469aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41976.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_144_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18239..19471)
DNA (1233bp) protein (411aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N9L2_9BIFI
Transporter, major facilitator domain protein {ECO:0000313|EMBL:ETO96119.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
multidrug resistance protein
L1_008_000G1_scaffold_144_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19633..21969)
DNA (2337bp) protein (779aa)
DNA gyrase, B subunit, C-terminal domain protein {ECO:0000313|EMBL:EFM41974.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EFM41974.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
gyrB2; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Q0_9BIFI
L1_008_000G1_scaffold_144_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22069..23454)
DNA (1386bp) protein (462aa)
RNA polymerase sigma factor SigA n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N9L0_9BIFI
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
RNA polymerase sigma factor
L1_008_000G1_scaffold_144_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23601..24326)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5P8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41972.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_144_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24535..25614
DNA (1080bp) protein (360aa)
idsA; polyprenyl synthase (EC:2.5.1.30)
Polyprenyl synthetase n=2 Tax=Bifidobacterium dentium RepID=E0Q5P7_9BIFI
Polyprenyl synthetase {ECO:0000313|EMBL:EFM41971.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_144_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25735..27903
DNA (2169bp) protein (723aa)
Kinase domain protein {ECO:0000313|EMBL:EFM41970.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EFM41970.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
pknA2; serine/threonine protein kinase (EC:2.7.11.1)
Kinase domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5P6_9BIFI
L1_008_000G1_scaffold_144_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27944..28633)
DNA (690bp) protein (230aa)
plsC2; s1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
PlsC2 1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ADB10023.1}; EC=2.3.1.51 {ECO:0000313|EMBL:ADB10023.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
PlsC2 1-acyl-sn-glycerol-3-phosphate acyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2QB37_BIFDB
L1_008_000G1_scaffold_144_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28685..29239
DNA (555bp) protein (185aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8H5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96150.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
membrane protein
L1_008_000G1_scaffold_144_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29419..30471)
DNA (1053bp) protein (351aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Anthranilate phosphoribosyltransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q5P3_9BIFI
trpD; anthranilate phosphoribosyltransferase
L1_008_000G1_scaffold_144_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30702..33578)
DNA (2877bp) protein (959aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QB40_BIFDB
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
secA; protein translocase subunit secA
L1_008_000G1_scaffold_144_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33771..34427)
DNA (657bp) protein (219aa)
Ribosomal subunit interface protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTI3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27346.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
30S ribosomal protein S30
L1_008_000G1_scaffold_144_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34957..35634)
DNA (678bp) protein (226aa)
Regulatory protein RecX n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N9K1_9BIFI
Regulatory protein RecX {ECO:0000313|EMBL:ETO96176.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
RecX-like protein
L1_008_000G1_scaffold_144_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(35638..36798)
DNA (1161bp) protein (387aa)
Protein RecA n=11 Tax=Bifidobacterium RepID=D2QB43_BIFDB
recA; RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_144_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37057..37389)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S8G8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41961.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_144_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37396..37905)
DNA (510bp) protein (170aa)
Transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2QB45_BIFDB
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFM41960.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
transcriptional regulator
L1_008_000G1_scaffold_144_30
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37967..38530)
DNA (564bp) protein (188aa)
Competence/damage-inducible domain protein CinA n=2 Tax=Bifidobacterium dentium RepID=E0Q5N5_9BIFI
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:ETO96223.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
cinA; competence-damage protein cinA
Displaying items 1-30 of 265 in total

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