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L1_008_000G1_scaffold_166

Search features with annotation key words

Displaying items 61-90 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_166_61
unknown

Not on your lists

63011..63118
DNA (108bp) protein (36aa)

This feature has no annotations

L1_008_000G1_scaffold_166_62
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63132..63329)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=J0Y617_9PSED
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AHC33458.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_63
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63373..64338)
DNA (966bp) protein (322aa)
WGS project CAEQ00000000 data, annotated contig 1606 n=3 Tax=cellular organisms RepID=F9W7G2_TRYCI
cation transporter
Cation transporter {ECO:0000313|EMBL:AHC33457.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_64
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64350..64625)
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=Pseudomonas RepID=UPI0002896405
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHC33456.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_65
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64845..66170)
DNA (1326bp) protein (442aa)
Outer membrane porin n=2 Tax=Pseudomonas RepID=J1IN97_9PSED
porin
Porin {ECO:0000313|EMBL:AHC33455.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_66
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66388..66720)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=J0PQU7_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJF72469.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
L1_008_000G1_scaffold_166_67
unknown

Not on your lists

66873..67013
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_000G1_scaffold_166_68
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67669..68097
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=J1IM22_9PSED
integrating conjugative element protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_69
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68094..69035
DNA (942bp) protein (314aa)
Integrating conjugative element protein n=3 Tax=Pseudomonas RepID=J0PJD6_9PSED
integrating conjugative element protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_70
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69056..70417
DNA (1362bp) protein (454aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6HUT2_9PSED
integrating conjugative element protein
Integrating conjugative element protein {ECO:0000313|EMBL:AHC33450.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_71
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70426..70806
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=J0PQU2_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_72
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70803..72317
DNA (1515bp) protein (505aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=J0YDT3_9PSED
membrane protein
Membrane protein {ECO:0000313|EMBL:AHC33448.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_73
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72350..72673)
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=J1IM21_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_74
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72909..73397)
DNA (489bp) protein (163aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=S6I5H0_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC33446.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_75
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73603..75489
DNA (1887bp) protein (629aa)
Integrating conjugative element relaxase n=2 Tax=Pseudomonas RepID=J0PJD3_9PSED
integrating conjugative element relaxase
Integrating conjugative element relaxase {ECO:0000313|EMBL:EJF72461.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
L1_008_000G1_scaffold_166_76
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75486..76805
DNA (1320bp) protein (440aa)
Integrase n=2 Tax=Pseudomonas RepID=J1IN89_9PSED
tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000313|EMBL:AHC33444.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
L1_008_000G1_scaffold_166_77
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77778..80342)
DNA (2565bp) protein (855aa)
ATP-dependent chaperone protein ClpB n=3 Tax=Pseudomonas RepID=I2BU67_PSEFL
clpB; ATP-dependent chaperone protein ClpB
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_78
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80478..81203)
DNA (726bp) protein (242aa)
Multicopper polyphenol oxidase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H7G6_9PSED
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_166_79
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81200..82162)
DNA (963bp) protein (321aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Pseudouridine synthase n=4 Tax=Pseudomonas RepID=I2BVY0_PSEFL
L1_008_000G1_scaffold_166_80
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82312..83337
DNA (1026bp) protein (342aa)
Outer membrane protein assembly factor BamD n=4 Tax=Pseudomonas RepID=I2BXW3_PSEFL
competence lipoprotein ComL
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_166_81
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83465..83698
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=I2BVE9_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58232.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_166_82
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83685..84857)
DNA (1173bp) protein (391aa)
thiO; glycine oxidase ThiO (EC:1.4.3.19)
ThiO protein {ECO:0000313|EMBL:AFJ59840.1}; EC=1.4.3.19 {ECO:0000313|EMBL:AFJ59840.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Glycine oxidase ThiO n=3 Tax=Pseudomonas RepID=I2C007_PSEFL
L1_008_000G1_scaffold_166_83
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84854..85258)
DNA (405bp) protein (135aa)
Putative type IV pilus-like protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6IT96_9PSED
pilE; type IV pilus biogenesis protein PilE
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_84
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85270..85794)
DNA (525bp) protein (175aa)
Type IV pilus assembly protein PilX n=1 Tax=Pseudomonas sp. CFT9 RepID=S6HAH1_9PSED
pilus assembly protein PilX
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_85
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85806..86513)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6IXD6_9PSED
prepilin-type N-terminal cleavage/methylation domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_86
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86510..86992)
DNA (483bp) protein (161aa)
Type IV pilus modification protein PilV n=2 Tax=Pseudomonas RepID=I2BR51_PSEFL
pilV; type IV pilus modification protein PilV
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_87
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87189..87770
DNA (582bp) protein (194aa)
Putative type IV pilus-like protein n=2 Tax=Pseudomonas RepID=S6HE57_9PSED
prepilin-type N-terminal cleavage/methylation domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58922.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_166_88
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87724..88671)
DNA (948bp) protein (316aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=4 Tax=Pseudomonas RepID=I2BNF5_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_166_89
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88853..89305)
DNA (453bp) protein (151aa)
fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase FkpB (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pseudomonas RepID=I2BYV8_PSEFL
L1_008_000G1_scaffold_166_90
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89298..89810)
DNA (513bp) protein (171aa)
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Lipoprotein signal peptidase n=3 Tax=Pseudomonas RepID=I2BNW3_PSEFL
Displaying items 61-90 of 103 in total

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