ggKbase home page

L1_008_000G1_scaffold_345

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_345_31
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35963..37000)
DNA (1038bp) protein (346aa)
Rieske domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QQH9_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43116.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Vanillate O-demethylase oxygenase subunit
L1_008_000G1_scaffold_345_32
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37128..38051
DNA (924bp) protein (308aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IKW1_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS45137.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
transcriptional regulator
L1_008_000G1_scaffold_345_33
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38108..39262)
DNA (1155bp) protein (385aa)
Flavin containing amine oxidoreductase family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q9I4_9ENTR
Monooxygenase {ECO:0000313|EMBL:KDE37329.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
Salicylate hydroxylase
L1_008_000G1_scaffold_345_34
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39530..40912
DNA (1383bp) protein (461aa)
Xanthine permease family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YIS4_9ENTR
Xanthine permease family protein {ECO:0000313|EMBL:EJI87930.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
xanthine permease
L1_008_000G1_scaffold_345_35
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40890..41390
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QQI2_9ENTR
OHCU decarboxylase {ECO:0000313|EMBL:KDE37327.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
OHCU decarboxylase
L1_008_000G1_scaffold_345_36
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41387..41710
DNA (324bp) protein (108aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Hydroxyisourate hydrolase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IKW6_9ENTR
5-hydroxyisourate hydrolase
L1_008_000G1_scaffold_345_37
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41826..43145)
DNA (1320bp) protein (440aa)
Guanine deaminase {ECO:0000313|EMBL:EJI87933.1}; EC=3.5.4.3 {ECO:0000313|EMBL:EJI87933.1};; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
Guanine deaminase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q9I8_9ENTR
guaD; Guanine deaminase
L1_008_000G1_scaffold_345_38
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43418..43660)
DNA (243bp) protein (81aa)
Uncharacterized protein n=17 Tax=Escherichia coli RepID=L3RSZ2_ECOLX
Salmonella enterica subsp. enterica serovar Typhi genome assembly 10541_1#60 {ECO:0000313|EMBL:CEP54908.1}; Uncharacterised protein {ECO:0000313|EMBL:CQS61203.1}; TaxID=90370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhi.;"
transcription factor
L1_008_000G1_scaffold_345_39
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44116..44661
DNA (546bp) protein (182aa)
Acetyltransferase family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QJV4_9ENTR
Acetyltransferase family protein {ECO:0000313|EMBL:EJI91788.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
GCN5 family acetyltransferase
L1_008_000G1_scaffold_345_40
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44740..45069)
DNA (330bp) protein (110aa)
Putative HTH-type transcriptional regulator ydep n=1 Tax=Serratia plymuthica 4Rx13 RepID=S0AHF3_SERPL
ydeP2; putative HTH-type transcriptional regulator ydep
Putative HTH-type transcriptional regulator ydep {ECO:0000313|EMBL:AGO55932.1}; TaxID=682634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica 4Rx13.;"
L1_008_000G1_scaffold_345_41
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45160..45486
DNA (327bp) protein (109aa)
SnoaL-like domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IP53_9ENTR
Polyketide cyclase {ECO:0000313|EMBL:KDE33600.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L1_008_000G1_scaffold_345_42
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45486..46265
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase n=2 Tax=Serratia plymuthica RepID=L0VZF3_SERPL
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AGO55930.1}; TaxID=682634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica 4Rx13.;"
L1_008_000G1_scaffold_345_43
Yokenella regensburgei, Yokenella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46720..47409
DNA (690bp) protein (230aa)
Membrane protein n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z5K0_9ENTR
Membrane protein {ECO:0000313|EMBL:EHM47327.1}; TaxID=1002368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yokenella.;" source="Yokenella regensburgei ATCC 43003.;"
hypothetical protein
L1_008_000G1_scaffold_345_44
Pectobacterium wasabiae, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47644..48120)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pectobacterium wasabiae CFBP 3304 RepID=J8THS2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EJS95296.1}; TaxID=1175631 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium wasabiae CFBP 3304.;"
hypothetical protein
L1_008_000G1_scaffold_345_45
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48179..48748)
DNA (570bp) protein (190aa)
TetR family transcriptional regulator n=1 Tax=Enterobacter cloacae RepID=UPI0003643AE8
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43015.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
TetR family transcriptional regulator
L1_008_000G1_scaffold_345_46
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49109..52159
DNA (3051bp) protein (1017aa)
Formate dehydrogenase, nitrate-inducible, major subunit n=2 Tax=Citrobacter RepID=R8UZ72_9ENTR
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:ETX71021.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
FdnG; molybdopterin-Binding (MopB) domain of the MopB superfamily of proteins, alpha subunit FdnG
L1_008_000G1_scaffold_345_47
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52172..53059
DNA (888bp) protein (296aa)
Formate dehydrogenase O beta subunit {ECO:0000313|EMBL:CEJ64221.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CEJ64221.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
formate dehydrogenase subunit beta (EC:1.2.1.2)
Formate dehydrogenase, beta subunit n=1 Tax=Shigella flexneri 1235-66 RepID=I6H4X5_SHIFL
L1_008_000G1_scaffold_345_48
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53052..53705
DNA (654bp) protein (218aa)
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:KEL81881.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KEL81881.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
formate dehydrogenase-N subunit gamma (EC:1.2.1.2)
Formate dehydrogenase n=4 Tax=Citrobacter RepID=J0M3K3_9ENTR
L1_008_000G1_scaffold_345_49
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53897..54811
DNA (915bp) protein (305aa)
Glycosyltransferase n=1 Tax=Enterobacter sp. (strain 638) RepID=A4W8Z9_ENT38
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABP60179.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
L1_008_000G1_scaffold_345_50
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54822..55898)
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
GHKL domain protein n=2 Tax=Klebsiella RepID=J5YCF8_9ENTR
two-component hybrid sensor and regulator
L1_008_000G1_scaffold_345_51
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55895..56599)
DNA (705bp) protein (235aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Enterobacter sp. (strain 638) RepID=A4W8Z7_ENT38
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABP60177.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
L1_008_000G1_scaffold_345_52
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56975..57382
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Klebsiella sp. OBRC7 RepID=J4XPA3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EJU35851.1}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
hypothetical protein
L1_008_000G1_scaffold_345_53
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57579..60695
DNA (3117bp) protein (1039aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Enterobacter sp. (strain 638) RepID=A4W8Z5_ENT38
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ABP60175.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein
L1_008_000G1_scaffold_345_54
Cronobacter dublinensis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60716..61066)
DNA (351bp) protein (117aa)
Mll3930 protein n=1 Tax=Cronobacter dublinensis 1210 RepID=K8AVK0_9ENTR
Mll3930 protein {ECO:0000313|EMBL:CCJ80037.1}; TaxID=1208656 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter dublinensis 1210.;"
membrane protein
L1_008_000G1_scaffold_345_55
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61194..61799)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YM15_9ENTR
S-transferase {ECO:0000313|EMBL:KDE33598.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
S-transferase
L1_008_000G1_scaffold_345_56
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62085..62975
DNA (891bp) protein (297aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IQD3_9ENTR
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EJI89179.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
glycine cleavage system regulatory protein
L1_008_000G1_scaffold_345_57
Serratia grimesii, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63043..63741
DNA (699bp) protein (233aa)
Pseudouridine synthase n=1 Tax=Serratia proteamaculans (strain 568) RepID=A8GIU5_SERP5
Pseudouridylate synthase {ECO:0000313|EMBL:KFB89746.1}; TaxID=82995 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia grimesii.;"
pseudouridine synthase
L1_008_000G1_scaffold_345_58
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63591..64118)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5245 RepID=H3M3B0_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EHT00452.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
Displaying items 31-58 of 58 in total

View Taxonomy