ggKbase home page

L1_008_000G1_scaffold_385

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_385_31
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31630..32526
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C009_CLOSY
LysR substrate binding domain protein {ECO:0000313|EMBL:ERI77403.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
LysR family transcriptional regulator
L1_008_000G1_scaffold_385_32
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32582..33202)
DNA (621bp) protein (207aa)
Rubrerythrin n=4 Tax=Clostridium RepID=E7GRQ4_CLOSY
Rubrerythrin {ECO:0000313|EMBL:EGA92495.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Rubrerythrin
L1_008_000G1_scaffold_385_33
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33467..33721)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=U2DCY7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI77401.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L1_008_000G1_scaffold_385_34
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34077..34769
DNA (693bp) protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
methylthioadenosine nucleosidase (EC:3.2.2.9 3.2.2.16)
MTA/SAH nucleosidase n=3 Tax=Clostridium RepID=E9SSS4_CLOSY
L1_008_000G1_scaffold_385_35
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34935..35957
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SSS3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03758.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000G1_scaffold_385_36
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36139..37473)
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase n=3 Tax=Clostridium RepID=E7GRQ8_CLOSY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Glu/Leu/Phe/Val dehydrogenase
L1_008_000G1_scaffold_385_37
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37749..39098
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIK5_9CLOT
L1_008_000G1_scaffold_385_38
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39204..39701)
DNA (498bp) protein (166aa)
HD domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BYU1_CLOSY
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EGA92501.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_385_39
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39718..40605)
DNA (888bp) protein (296aa)
Metal dependent phosphohydrolase n=2 Tax=Clostridium RepID=E7GRR0_CLOSY
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EGA92501.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
metal dependent phosphohydrolase
L1_008_000G1_scaffold_385_40
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40770..41951
DNA (1182bp) protein (394aa)
Hemolysin n=2 Tax=Clostridium symbiosum RepID=E7GRR1_CLOSY
Hemolysin {ECO:0000313|EMBL:EGA92502.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative aminotransferase
L1_008_000G1_scaffold_385_41
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42022..43269
DNA (1248bp) protein (416aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C000_CLOSY
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:EGA92503.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
sodium:dicarboxylate symporter
L1_008_000G1_scaffold_385_42
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43312..43578
DNA (267bp) protein (89aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SSR7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92504.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000G1_scaffold_385_43
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43952..45694
DNA (1743bp) protein (581aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRR4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92505.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
oppA; oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily
L1_008_000G1_scaffold_385_44
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45799..46716
DNA (918bp) protein (306aa)
Binding-protein-dependent transport system inner membrane component n=3 Tax=Clostridium RepID=E7GRR5_CLOSY
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EGA92506.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC transporter permease
L1_008_000G1_scaffold_385_45
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46727..48076
DNA (1350bp) protein (450aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRR6_CLOSY
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EGA92507.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC transporter permease
L1_008_000G1_scaffold_385_46
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48093..49127
DNA (1035bp) protein (345aa)
Oligopeptide ABC transporter, ATP-binding protein OppD n=3 Tax=Clostridium RepID=U2DCX7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92508.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
oppD; oligopeptide transporter subunit ; ATP-binding component of ABC superfamily
L1_008_000G1_scaffold_385_47
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49105..50088
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter n=3 Tax=Clostridium symbiosum RepID=E7GRR8_CLOSY
Oligopeptide/dipeptide ABC transporter {ECO:0000313|EMBL:EGA92509.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
oligopeptide/dipeptide ABC transporter ATPase
L1_008_000G1_scaffold_385_48
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50105..51178
DNA (1074bp) protein (358aa)
Putative D-cysteine desulfhydrase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSR1_CLOSY
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:ERI77384.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Pyridoxal phosphate-dependent deaminase
L1_008_000G1_scaffold_385_49
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51198..52580
DNA (1383bp) protein (461aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRS0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92511.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Transglutaminase-like enzymes, putative cysteine proteases
L1_008_000G1_scaffold_385_50
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52577..53380
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03772.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
amino acid amidase
L1_008_000G1_scaffold_385_51
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53399..54400
DNA (1002bp) protein (334aa)
D-cysteine desulfhydrase (EC:4.4.1.15)
D-cysteine desulfhydrase n=2 Tax=Clostridium symbiosum RepID=E7GRS2_CLOSY
D-cysteine desulfhydrase {ECO:0000313|EMBL:EGA92513.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000G1_scaffold_385_52
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54478..55443
DNA (966bp) protein (322aa)
Renal dipeptidase family protein n=2 Tax=Clostridium symbiosum RepID=E9SSQ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92514.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Zn-dependent dipeptidase, microsomal dipeptidase
L1_008_000G1_scaffold_385_53
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55422..57497)
DNA (2076bp) protein (692aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSQ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03775.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative sigma54 specific transcriptional regulator
Displaying items 31-53 of 53 in total

View Taxonomy