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L1_008_000G1_scaffold_411

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_411_1
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2..106
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Atopobium sp. ICM58 RepID=J2YXW5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJN52983.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
L1_008_000G1_scaffold_411_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

286..2337
DNA (2052bp) protein (684aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J551_9ACTO
alpha amylase
L1_008_000G1_scaffold_411_3
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2501..4696
DNA (2196bp) protein (732aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
glgB; 1,4-alpha-glucan branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZBG0_9ACTO
L1_008_000G1_scaffold_411_4
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4805..4978)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDN1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95275.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_000G1_scaffold_411_5
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5021..5923)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZDN6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72470.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
thioredoxin domain-containing protein
L1_008_000G1_scaffold_411_6
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6023..7021)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXW0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF80275.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
hypothetical protein
L1_008_000G1_scaffold_411_7
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7021..8505)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDN4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN81309.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
OmpA/MotB protein
L1_008_000G1_scaffold_411_8
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8622..8864)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1SRJ7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95311.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_411_9
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8915..10105)
DNA (1191bp) protein (397aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Actinomyces sp. ICM39 RepID=J3EG88_9ACTO
L1_008_000G1_scaffold_411_10
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10132..11238)
DNA (1107bp) protein (369aa)
PF06224 family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J535_9ACTO
PF06224 family protein {ECO:0000313|EMBL:EJN45948.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
L1_008_000G1_scaffold_411_11
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11238..11849)
DNA (612bp) protein (204aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
Endonuclease NucS n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQ42_9ACTO
hypothetical protein
L1_008_000G1_scaffold_411_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11953..12357)
DNA (405bp) protein (135aa)
PF10739 family protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J542_9ACTO
PF10739 family protein {ECO:0000313|EMBL:EWC95318.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_000G1_scaffold_411_13
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12383..12655)
DNA (273bp) protein (91aa)
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein n=2 Tax=Actinomyces odontolyticus RepID=A7BDP1_9ACTO
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein {ECO:0000313|EMBL:EFF80268.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
H+transporting two-sector ATPase aubunit delta/epsilon
L1_008_000G1_scaffold_411_14
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12655..14103)
DNA (1449bp) protein (483aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
ATP synthase subunit beta n=2 Tax=Actinomyces RepID=A7BDP2_9ACTO
ATP synthase subunit beta
L1_008_000G1_scaffold_411_15
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14129..15058)
DNA (930bp) protein (310aa)
ATP synthase gamma chain n=1 Tax=Actinomyces sp. ICM39 RepID=J2YQ40_9ACTO
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
ATP synthase F0F1 subunit gamma
L1_008_000G1_scaffold_411_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15062..16699)
DNA (1638bp) protein (546aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
ATP synthase subunit alpha n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZDP5_9ACTO
ATP synthase F1 subunit alpha
L1_008_000G1_scaffold_411_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16745..17563)
DNA (819bp) protein (273aa)
ATP synthase subunit delta n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7X7_9ACTO
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
ATP synthase, F1 subunit delta
L1_008_000G1_scaffold_411_18
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17560..18120)
DNA (561bp) protein (187aa)
ATP synthase subunit b n=2 Tax=Actinomyces RepID=S2ZR06_9ACTO
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
ATP synthase subunit b
L1_008_000G1_scaffold_411_19
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18126..18335)
DNA (210bp) protein (70aa)
ATP synthase F0, C subunit n=3 Tax=Actinomyces RepID=J0SUD1_9ACTO
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
atpE; ATP synthase F0 subunit C
L1_008_000G1_scaffold_411_20
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18377..19267)
DNA (891bp) protein (297aa)
ATP synthase subunit a n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A892_9ACTO
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
ATP synthase F0 subunit A
L1_008_000G1_scaffold_411_21
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19351..19644)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZDQ0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72485.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
L1_008_000G1_scaffold_411_22
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19641..20747)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z7Y0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72486.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
glycosyl transferase family protein
L1_008_000G1_scaffold_411_23
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20744..21418)
DNA (675bp) protein (225aa)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Actinomyces odontolyticus RepID=A7BDQ1_9ACTO
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EFF80258.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
translation factor SUA5
L1_008_000G1_scaffold_411_24
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21415..22311)
DNA (897bp) protein (299aa)
Methyltransferase, HemK family n=1 Tax=Actinomyces sp. ICM39 RepID=J3J4Z7_9ACTO
Methyltransferase, HemK family {ECO:0000313|EMBL:EJN45971.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
protein-(glutamine-N5) methyltransferase
L1_008_000G1_scaffold_411_25
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22323..23417)
DNA (1095bp) protein (365aa)
Peptide chain release factor 1 n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXU1_9ACTO
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
peptide chain release factor 1
L1_008_000G1_scaffold_411_26
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(23512..23733)
DNA (222bp) protein (74aa)
50S ribosomal protein L31 n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KQM7_9ACTO
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
hypothetical protein
L1_008_000G1_scaffold_411_27
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23990..25189)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDQ5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95301.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
L1_008_000G1_scaffold_411_28
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25241..26860)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM47 RepID=J1B908_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95312.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L1_008_000G1_scaffold_411_29
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26990..28165)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDQ8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN81332.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
L1_008_000G1_scaffold_411_30
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28273..30111)
DNA (1839bp) protein (613aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
rho; transcription termination factor Rho (EC:3.6.1.-)
Transcription termination factor Rho n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZBH1_9ACTO
Displaying items 1-30 of 53 in total

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