ggKbase home page

L1_008_000G1_scaffold_171_23

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 24792..25517

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Anaerostipes RepID=B0M9F3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 467
  • Evalue 6.80e-129
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 467
  • Evalue 9.50e-129
RNA polymerase, sigma subunit, RpoX/SigF similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 240.0
  • Bit_score: 320
  • Evalue 2.20e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaerostipes caccae → Anaerostipes → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 726
ATGGACGAGACAAGAGAATTATTAAAGCTTACGAAAGAAGGAGATCAGGATGCGAGAGAGAAGATCGTGCTTGACAACATGGGGCTGATCTGGAGTGTGGTAAAGCGTTTTACAGGGCGGGGACACGAGCCCGAAGATCTGTTCCAGATCGGGAGCATCGGACTTTTAAAGGCAGTGGACAAGTTTGACCTCTCCTATGATGTAAAATTTTCTACTTATGCGGTGCCGATGATCACCGGGGAGATCAAACGGTTTTTAAGGGATGACGGGATGATCAAGGTCAGCCGTTCCCTGAAGGAGATCGCCTACCAGGTCCGGCAGGCAGGAGAGGCTTTTGCCATGAAGTACAACAGGGAAGCAACGATAGACGAACTCTCCAGGGAGACAAAGATTGCCAGAGATGAGATCGTCGTCGCACTGGAGGCAAACAAAGATGTGGAATCTATTTATCAGCCAAGCTATCAAAGCGACGACAGCCAGGTGCTTTTGGTAGATAAACTGCCAGGCGAGGAAAATGAGTCAGATACTGTCATCAACCATGTGATGCTGGAAGAACTCATGGACACACTGTCCGGAGATGAGAGAGAATTGATCACTATGCGGTACTTCCATGGGAAGACACAGCAGGAAATCGCAAAAAAACTTTCAATTTCCCAGGTACAGGTTTCAAGGATGGAAAAGAAAATATTGCTCCGTATGAGAAAACAAATTCTTGGACATAGCTGA
PROTEIN sequence
Length: 242
MDETRELLKLTKEGDQDAREKIVLDNMGLIWSVVKRFTGRGHEPEDLFQIGSIGLLKAVDKFDLSYDVKFSTYAVPMITGEIKRFLRDDGMIKVSRSLKEIAYQVRQAGEAFAMKYNREATIDELSRETKIARDEIVVALEANKDVESIYQPSYQSDDSQVLLVDKLPGEENESDTVINHVMLEELMDTLSGDERELITMRYFHGKTQQEIAKKLSISQVQVSRMEKKILLRMRKQILGHS*