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L1_008_000G1_scaffold_47_128

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 125215..126327

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Clostridium RepID=B6FR93_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 370.0
  • Bit_score: 711
  • Evalue 4.10e-202
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 370.0
  • Bit_score: 711
  • Evalue 5.80e-202
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 373.0
  • Bit_score: 632
  • Evalue 6.90e-179

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Taxonomy

Tyzzerella nexilis → Tyzzerella → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGAAGAAAGAGCTATAAAATTTGAGGAAAAATTGAAAAATCTGGTTGCTTTAGGGAAGAAGAAGAAAAGTATTCTTGAGATACAGGAGATCAATGAAGTTTTCTCAGATATGGAGCTGGAAGCAGAACAGATGGAGAAAATATTCGAGTATTTGGAATCGCAGAATATTGATGTACTCAGAATCAGTCCGGACACGGATGATGCAGATGATGTGGAGATTTTGTTGACGGATGAAGATGAAGTTGACATGGAAAAGATTGATTTGTCTGTGCCGGATGGAATCAGCATCGAAGATCCGGTGCGTATGTATCTGAAAGAAATCGGTAAAGTGCCATTGTTGAGTGCAGAGGAAGAAATTGAACTGGCGAAACGGATGGCAGAAGGTGATGAAGATGCGAAAAAGAGGCTTGCAGAGGCAAATCTTCGTCTTGTTGTCAGCATTGCGAAACGCTATGTGGGACGTGGAATGTTATTTCTTGACTTGATTCAGGAAGGAAATTTGGGATTGATCAAAGCGGTTGAAAAGTTTGATTATCAGAAAGGATTCAAATTCAGTACGTATGCGACATGGTGGATCAGACAGGCAATTACGAGAGCGATTGCAGATCAGGCGAGAACCATTCGTATTCCGGTTCATATGGTGGAGACAATTAACAAATTGATTCGCGTATCAAGACAGCTGCTGCAGGAATTGGGGCGTGAGCCGTTGCCGGAGGAGATTGCAGAAGAACTGGACATGCCGGTGGAAAGAGTACGCGAGATTTTGAAGATTTCTCAGGAACCTGTATCTTTGGAAACACCGATCGGTGAAGAAGAGGACAGTCATTTGGGAGATTTTATTCAGGATGACAATGTTCCGGTGCCGGCTGAGGCAGCAGCAGCAACGTTGCTGAAAGAGCAATTGGGAGAAGTGTTGGATACGTTGACTGACAGAGAACAGAAAGTATTGCGTCTTCGTTTTGGTATGAACGATGGACGTGCACGTACATTGGAAGAAGTCGGAAAAGAATTTGACGTCACCCGTGAAAGAATCCGTCAGATTGAGGCGAAAGCGCTTCGAAAACTCCGTCATCCAAGCAGAAGCCGTAAACTTCGTGATTATTTGGATTAG
PROTEIN sequence
Length: 371
MEERAIKFEEKLKNLVALGKKKKSILEIQEINEVFSDMELEAEQMEKIFEYLESQNIDVLRISPDTDDADDVEILLTDEDEVDMEKIDLSVPDGISIEDPVRMYLKEIGKVPLLSAEEEIELAKRMAEGDEDAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYQKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPLPEEIAEELDMPVERVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPAEAAAATLLKEQLGEVLDTLTDREQKVLRLRFGMNDGRARTLEEVGKEFDVTRERIRQIEAKALRKLRHPSRSRKLRDYLD*