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L1_008_000G1_scaffold_26_33

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(27880..29172)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane porin, OprD family n=2 Tax=Pseudomonas RepID=I2BXN5_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 430.0
  • Bit_score: 869
  • Evalue 1.10e-249
outer membrane porin, OprD family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 430.0
  • Bit_score: 869
  • Evalue 3.00e-250
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 430.0
  • Bit_score: 869
  • Evalue 1.50e-249

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGCTGTCGACCCAGCCACAGGCTTGCCCGCCTGTTCGCTCTTGCCGTCTGACCCACACCGCCCTCGCCAGTGCCGCTGCCCTTGCCGGCTTTGCGCCGCTCAGCCAGGCTGCCTTCTTCGAAGACAGTAGCGCGACCCTGGAAACCCGCAACATGTACTTCAATCGCGACTTTCGCGACGGTACCAGTGCGCAGCAATCCAAGCGCGACGAATGGGCCCAGGGCTTCATGCTCAACCTGCAATCAGGCTACACCGACGGCACCGTCGGCTTTGGCGTGGATGCGCTGGGCATGCTCGGCGTCAAGCTCGACTCCAGCCCCGACCGCACCGGCACCGGCCTGCTGCCGACCCACGATGACGGCCGCGCCGCCAACGAGTACGCCAAGCTGGGCCTGACCGGCAAAGTGAAAATCTCGGCGACTGAGCTGAAAATCGGCTCGCTGATCCCCGAACTGCCGATCCTCAAGCCCAACGACGGGCGCATCCTGCCGCAGACCTTCAACGGTGGCTTGATCACCTCCAAGGAATTCAAGAACCTGGTGTTCACCGGTGGCCGCCTGGACAAAGCCAAGGACCGCGACGACACCAACTACGAAGACATCGCGCTCAATAACAAGAACAGCCGCTTCCTCAGCGGTGCCACCGGCAAGCACTTCAACTTCGGTGGCGTCGACTACAAGTTCGCCGACAAGATCACCGGCAGCTACCACTTCGCCCAACTCGACGACGTGTATCGCCAACACTTCTTCGGCATGGTCGCCTCACGCCCGATGGGCCCTGGCACTTTCGCCGCCGACCTGCGGCTGGCCATCAGCGATGACACCGGCTCGGCCCGCGGCGGCAATATCGACAACAAGTCCCTCAACGGCCTGTTCAGCTATGCCCTCAATGGCCATAAGCTCAGCGCCGGCTACCAGCACATGTCCGGCGACAGCGCCTTCCCATATGTGGATGGCAGCGACCCATACCTGGTCAACTTCGTGCAGATCAACGATTTTGCCGGCGCCGAAGAACGCTCCTGGCAGGCACGTTACGACTACGACTTCGCCAAGCTGGGCATTCCTGGCTTGAGTTTCATGAGCCGTTACCTCTCGGGTGACAACATCAAGCTCAAGAACGGCGAGACCGGCAAGGAGTGGGAACGCAACAGCGAGATCAAGTACGTGGTGCAAAGCGGCACGTTCAAAGATGTGGCCGTGCGCCTGCGTAACGCCACCTATCGTTCCAACTACTCGGCCCGTGATGCGGATGAAATGCGCTTGCTGGTCAGCTATAGCGTCGCACTTTGGTAG
PROTEIN sequence
Length: 431
MLSTQPQACPPVRSCRLTHTALASAAALAGFAPLSQAAFFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFMLNLQSGYTDGTVGFGVDALGMLGVKLDSSPDRTGTGLLPTHDDGRAANEYAKLGLTGKVKISATELKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDIALNNKNSRFLSGATGKHFNFGGVDYKFADKITGSYHFAQLDDVYRQHFFGMVASRPMGPGTFAADLRLAISDDTGSARGGNIDNKSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVDGSDPYLVNFVQINDFAGAEERSWQARYDYDFAKLGIPGLSFMSRYLSGDNIKLKNGETGKEWERNSEIKYVVQSGTFKDVAVRLRNATYRSNYSARDADEMRLLVSYSVALW*