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L1_008_000G1_scaffold_53_5

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(4492..5196)

Top 3 Functional Annotations

Value Algorithm Source
vicR; response regulator protein Vicr (EC:2.7.7.65) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 234.0
  • Bit_score: 459
  • Evalue 3.00e-127
Sensory transduction protein RegX3 n=2 Tax=Bifidobacterium dentium RepID=E0Q8T7_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 462
  • Evalue 1.60e-127
Sensory transduction protein RegX3 {ECO:0000313|EMBL:EFM41229.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 462
  • Evalue 2.30e-127

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACACGTATTCTGATCGTCGAAGACGAGGAATCGTATCGAGAACCGCTGGTCTACCAGCTCACTCGCGAAGGCTATGACGTGTCCGCCGCAGCCACCGGCGAGGACGGGCTGGAACTGTTCACCCAGGGAGGCGTCGATCTGGTACTGCTCGACCTGATGCTTCCCGGTCTCGACGGTACCGCGCTGTGTCGCAGGATTCGTGAGCAAAGCCGTGTGCCGATCATCATGTTGACCGCCAAAAGCGCGGAAATCGACAAGGTGGTCGGTCTGGAGATCGGTGCGGACGACTATGTGACCAAGCCGTACTCCTTCCGCGAACTGCTGGCCCGCGTCCGCGCGGTATTGCGCCGCAATCAGATGGTCGCCGAATCCGACAGCGCCTCCGATGATGATATTCCGCTCGTGTGCGGCGACATCTCGATGAAGATCGGCCAGCATGAGGTGAGCGTGCGCGGTGAGAACGTGTTCTTCCCGCTCAAAGAATTCGAGCTGCTGGAATATCTCATGCAGAACAAGGGTCGCGTAATGACCCGTCACCAGCTCATCGACCGCATCTGGGGTTCCGATTACGTCGGCGACACCAAGACGCTGGATGTGCACGTCAAGCGTGTGCGTTCCAAGATCGAAGAGGATCCTGCGCACCCGAAATACCTGACCACCGTGCGTGGACTGGGATACAAGATCGATGCCCCGATCGAGTGA
PROTEIN sequence
Length: 235
MTRILIVEDEESYREPLVYQLTREGYDVSAAATGEDGLELFTQGGVDLVLLDLMLPGLDGTALCRRIREQSRVPIIMLTAKSAEIDKVVGLEIGADDYVTKPYSFRELLARVRAVLRRNQMVAESDSASDDDIPLVCGDISMKIGQHEVSVRGENVFFPLKEFELLEYLMQNKGRVMTRHQLIDRIWGSDYVGDTKTLDVHVKRVRSKIEEDPAHPKYLTTVRGLGYKIDAPIE*