ggKbase home page
Advanced Search
Search Help

L1_008_000G1_scaffold_511_11

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 10707..14906

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1399.0
  • Bit_score: 2738
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1399.0
  • Bit_score: 2738
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=3 Tax=Pseudomonas RepID=I2BLX9_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1399.0
  • Bit_score: 2738
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4200
TTGAAAGACCTACTGAATTTGCTGAAAAACCAGGGTCAAGTCGAAGAGTTCGACGCCATCCGTATTGGATTGGCATCGCCTGAGATGATCCGTTCGTGGTCGTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCGGTAAAGGATTACGAGTGCCTGTGCGGTAAGTACAAGCGCTTGAAGCACCGTGGTGTGATCTGCGAGAAGTGCGGCGTTGAAGTTGCGCTGGCCAAGGTTCGTCGTGAGCGCATGGCGCACATCGAACTGGCTTCGCCGGTTGCCCACATCTGGTTCCTGAAATCGCTGCCGTCCCGTATCGGCTTGCTGATGGACATGACCCTGCGTGATATCGAACGCGTTCTCTACTTCGAGAGCTATGTCGTTATCGATCCAGGCATGACCACCCTTGAAAAAGGTCAGCTGCTGAACGACGAGCAGTACTTCGAAGCGCTGGAAGAGTTCGGCGACGATTTCGATGCCCGCATGGGTGCCGAAGCTGTCCGCGAACTGCTGCACGCTATCGACCTGGAGCACGAGATTGGTCGTCTGCGTGAAGAGATTCCGCAAACCAACTCCGAAACCAAGATCAAGAAGCTGTCCAAGCGTCTGAAGTTGATGGAAGCCTTCCAGGGTTCCGGCAACTTGCCAGAGTGGATGGTGCTGACCGTTCTGCCGGTTCTGCCGCCAGACCTGCGTCCGCTGGTACCGTTGGACGGTGGTCGTTTCGCGACGTCCGACCTCAACGACCTGTACCGCCGCGTGATCAACCGTAACAACCGCTTGAAGCGCCTGCTTGATCTGTCCGCTCCGGACATCATCGTGCGCAACGAAAAGCGTATGTTGCAAGAAGCGGTCGATGCCCTGCTCGACAACGGTCGTCGTGGCCGCGCTATCACCGGTTCGAACAAGCGTCCTCTGAAATCCCTGGCTGACATGATCAAGGGTAAGCAAGGTCGTTTCCGTCAGAACTTGCTCGGTAAGCGTGTTGACTACTCCGGTCGTTCGGTAATTACCGTAGGCCCGACCCTGCGTCTGCACCAGTGCGGTCTGCCCAAGAAGATGGCACTCGAGCTGTTCAAGCCGTTCATCTTCGGCAAGCTGGAAATGCGCGGTCTCGCGACCACCATCAAAGCGGCCAAGAAAATGGTCGAGCGCGAACTGCCAGAGGTTTGGGACGTTCTCGCTGAAGTGATTCGCGAACACCCGGTTCTCCTCAACCGTGCACCGACCCTTCACCGTCTGGGTATCCAGGCGTTTGAACCTGTACTGATCGAAGGTAAGGCTATCCAGCTGCACCCTCTGGTCTGTGCCGCGTACAACGCCGACTTCGACGGCGACCAAATGGCCGTGCACGTACCGCTGACACTGGAAGCCCAGTTGGAAGCGCGTGCGTTGATGATGTCGACCAACAACATTCTGTCGCCAGCCAACGGTGAGCCAATCATCGTTCCGTCGCAGGACGTTGTATTGGGTCTGTACTACATGACTCGTGAAGCGATCAACGCCAAAGGCGAAGGTCGTGTGTTCGCTGACCTGCAAGAAGTTGACCGTGTGTTCCGTGCCGGCGAAGCCGCACTGCACGCCAAGGTCAAGGTGCGGATCCACGAAACCGTCAACGACCGTGACGGCGGCAGCGTGAGCAACACCCGTATCGTCGACACCACTGTCGGCCGTGCGCTGTTGTACCAGGTTGTTCCAAAAGGTCTGTCGTACGACGTCGTCAACCTGCCGATGAAGAAAAAGGCGATCTCCAAGCTGATCAACCAGTGCTACCGCGTGGTTGGTTTGAAAGAGACCGTTATCTTCGCTGACCAGTTGATGTACACAGGTTTCGCTTACTCGACTATCTCCGGCGTTTCCATCGGCGTTAACGACTTCGTTATCCCGGATGAAAAAGCCCGCATCATCAGTGCTGCCACTGACGAAGTGAAAGAGATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAAGTGATCGACCTTTGGTCCAAGGCCAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAAAGTCATCGACCGTCACGGCGACGAAGTTGACCAGGAGTCCTTCAACTCGATGTACATGATGGCCGACTCGGGCGCACGGGGTTCTGCTGCGCAGATCCGTCAGCTCGCCGGTATGCGTGGCCTGATGGCCAAGCCGGACGGTTCCATCATCGAAACGCCGATCACTGCGAACTTCCGTGAAGGTTTGAGCGTACTCCAGTACTTCATCTCTACTCACGGTGCTCGTAAGGGTCTTGCGGATACCGCGTTGAAAACCGCTAACTCCGGTTACCTGACTCGTCGTCTGGTAGACGTTGCACAAGATCTGGTTGTAACCGAGATCGATTGCGGCACCGAGCACGGCCTGCTGATGACTCCGCACATTGAAGGCGGTGACGTTGTAGAGCCGCTGGGTGAGCGCGTATTGGGTCGTGTTATTGCCCGTGACGTATTCAAGCCAGGCACCGAGGAAGTTATCGTTCCTGCCGGTACCCTGGTGGATGAGAAGTGGGTCGAGTTCATCGAACTCAACAGCATCGACGAAGTGATCGTTCGCTCGCCGATCAGCTGCGAAACCCGCTACGGCATCTGCGCCAAGTGCTACGGCCGTGACTTGGCTCGTGGTCACCAGGTGAACATCGGTGAAGCGGTCGGCGTTATCGCTGCCCAGTCCATCGGTGAGCCGGGTACCCAGCTGACCATGCGTACGTTCCACATCGGTGGTGCGGCAAGCCGGACCTCCGCAGCCGACAGTGTTCAGGTTAAGAATGGCGGTACCGTCCGTCTGCACAACCTCAAGCACGTTGAGCGAGTGGATGGCCACTTGGTTGCTGTGTCCCGTTCCGGTGAGCTGGCAATCGCTGATGACTACGGTCGTGAGCGTGAGCGTTACAAGCTGCCGTACGGTGCTGTGATTTCGGTTAAAGAAGGTGACAAGGTCGACGCTGGCGCAATCGTGGCCAAGTGGGATCCGCACACTCACCCAATCGTTACCGAAATGAAAGGTACCGTGACCTACGTGGGCATGGAAGAAGGCATCACGATCAAGCGTCAGACTGACGAATTGACCGGTATGACCAACATTGAAGTACTCGACGCCAAAGATCGTCCAGCTGCCGGCAAAGACATCCGTCCTGCCGTGAAGATGGTCGACGACAACGGCAAGGACCTGTTGCTGCCAGGCACTGACGTAATCGCTCAGTACTTCCTGCCAGCCAACGCCCTGGTCGGTGTAGCGGATGGTGCGAAGATCGCGATCGGTGATGTTATCGCGCGTATCCCGCAAGAAACTTCGAAGACCCGTGACATCACCGGTGGTCTGCCGCGTGTTGCCGACTTGTTCGAAGCTCGTCGTCCGAAAGAAGCGTCGATTCTGGCTGAAGTCAGCGGCACCATCGCGTTCGGTAAAGAGACCAAGGGCAAGCGCCGTCTGGTCATTACCCCGAACGACGGTAGCGATCCGTATGAAGAGCTGATTCCGAAGTGGCGTCACCTGAACGTGTTCGAAGGCGAACAGGTAAACCGCGGCGAAGTTATCTCCGACGGTCCGAGCGATCCACACGACATCCTGCGTCTGCTGGGTGTGAGTGCGCTGGCCAAGTACATCGTTAACGAGATCCAGGACGTTTACCGTCTGCAAGGCGTGAAGATCAACGACAAGCACATCGAGACCATCCTGCGTCAGATGCTGCGTAAAGTTGAAATCGCTGAATCCGGCGATTCCAGTTTCATCAAGGGCGACCAGATGGAACTGACTCACGTACTGGTAGAAAACGAGCGCCTGGCGAACGAAGAGAAATTTGTCTCCAAGTTCACTCGCGTGCTGCTGGGTATCACCAAGGCGTCGTTGTCCACTGAGTCGTTCATCTCGGCGGCCTCCTTCCAGGAGACCACTCGCGTACTGACCGAAGCAGCGGTAACCGGCAAGCGCGATTACCTGCGCGGCCTGAAAGAAAACGTAGTCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTTGGCTTACCACAGCGAGCGTAAGCGTCGCCGTGATGCTGACAAGCCGCTGCGCGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAACTCAAGCGGTAACTGA
PROTEIN sequence
Length: 1400
LKDLLNLLKNQGQVEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSLPSRIGLLMDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARMGAEAVRELLHAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNLPEWMVLTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIFGKLEMRGLATTIKAAKKMVERELPEVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRAGEAALHAKVKVRIHETVNDRDGGSVSNTRIVDTTVGRALLYQVVPKGLSYDVVNLPMKKKAISKLINQCYRVVGLKETVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIISAATDEVKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVIDRHGDEVDQESFNSMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLSVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLLMTPHIEGGDVVEPLGERVLGRVIARDVFKPGTEEVIVPAGTLVDEKWVEFIELNSIDEVIVRSPISCETRYGICAKCYGRDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADSVQVKNGGTVRLHNLKHVERVDGHLVAVSRSGELAIADDYGRERERYKLPYGAVISVKEGDKVDAGAIVAKWDPHTHPIVTEMKGTVTYVGMEEGITIKRQTDELTGMTNIEVLDAKDRPAAGKDIRPAVKMVDDNGKDLLLPGTDVIAQYFLPANALVGVADGAKIAIGDVIARIPQETSKTRDITGGLPRVADLFEARRPKEASILAEVSGTIAFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNVFEGEQVNRGEVISDGPSDPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQMLRKVEIAESGDSSFIKGDQMELTHVLVENERLANEEKFVSKFTRVLLGITKASLSTESFISAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERKRRRDADKPLRVSASEVEAALTEALNSSGN*