ggKbase home page

L1_008_000G1_scaffold_41_145

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(111380..112249)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 578
  • Evalue 4.60e-162
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 289.0
  • Bit_score: 441
  • Evalue 1.00e-121
Shikimate dehydrogenase n=2 Tax=Clostridium RepID=B6FS41_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 578
  • Evalue 3.30e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tyzzerella nexilis → Tyzzerella → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 870
ATGACAAATCAAATTACCGGACATACACGTCTGACCGGTCTTTTAGGAAGCCCGGTCGAACACAGCATCTCACCAATGATGCACAACGAAGCATTTCAACAATTAGGGCTTGACTATGCATACCTCGCTTTTGATGTTGGAACTGACAAATTAAAAACGGCTGTAGAAGGGCTTCGCACCTTAAATGTGCGCGGATTTAATCTGACAATGCCGGATAAAAACCTGATGTGCTCTCTTTGTGACAAGCTTTCTCCTGCTGCTGAGATCATCGGCGCCGTCAACACTGTCGTAAATGACAATGGCGTTCTGATCGGATATACAACTGACGGAGTCGGTTACATGCACGCAGTGAAGGATGCCGGTCACAACATCATCGGCAAAAAAATGACACTGCTCGGTGCCGGCGGCGCCGCAACTGCAATTTTAGTGCAGGCTGCACTAGATGGTGTGTCTGAAATTTCCGTATTCAATGTGCGGGACGATTTTTTCGCACGTGCCGAAAAAACAGTCGCTGATTTAAACGAACGGACAAACTGCAAAGTACGATTATTTGATTTTGAAAATCCTGATATTTTAAAAAGAGAAATCTCTGAAAGCGCAATTTTGACAAACGGAACCTCTGTAGGCATGTCTCCTGACACCGACGCCTGCATCATCAAAGATACTTCCGTATTCCACAAAGATCTGATTGTCTCTGATGTCATCTACAATCCGGAAGAGACAAAATTGTTAAGACTTGCAAAAGAAGCAGGGTGTCCGACATTCAACGGCCTGTATATGCTTTTATACCAGGGCGCAGAGGCATTTCGCCTGTGGACCGGGAAAGAAATGCCAATTCCAGTCATTAAAGAAAAATATTTTTCAAGATAG
PROTEIN sequence
Length: 290
MTNQITGHTRLTGLLGSPVEHSISPMMHNEAFQQLGLDYAYLAFDVGTDKLKTAVEGLRTLNVRGFNLTMPDKNLMCSLCDKLSPAAEIIGAVNTVVNDNGVLIGYTTDGVGYMHAVKDAGHNIIGKKMTLLGAGGAATAILVQAALDGVSEISVFNVRDDFFARAEKTVADLNERTNCKVRLFDFENPDILKREISESAILTNGTSVGMSPDTDACIIKDTSVFHKDLIVSDVIYNPEETKLLRLAKEAGCPTFNGLYMLLYQGAEAFRLWTGKEMPIPVIKEKYFSR*