ggKbase home page

L1_008_000G1_scaffold_328_45

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(63979..64650)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EDS16989.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDS16989.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 454
  • Evalue 7.70e-125
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 223.0
  • Bit_score: 420
  • Evalue 1.90e-115
Pseudouridine synthase, RluA family n=3 Tax=Bacteroides RepID=B0NKW4_BACSE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 454
  • Evalue 5.50e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides stercoris → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 672
ATGACTGTCGTATACGAAGACAATCATATCATTATAGTCAACAAGACCGCTTCCGAGATAGTTCAGGGAGACAAGACGGGTGATACGCCGCTTTCGGAAACCGTAAAGCTGTATCTTAAGGAGAAATACCAAAAGCCCGGCAATGTCTTTATAGGTGTTACACACCGTTTGGACCGCCCCGTAAGCGGTCTTGTTGTTTTTGCCAAAACGAGTAAGGCACTTGCCCGTCTGAACGAGATGTTCAGGAACAGTGAGGTGAAGAAAACCTATTGGGCAGTGGTGAAGAACCGCCCTCGGGAGTCAGAGGGTGAGTTGGTGAACTATTTGGTACGTAATGAGAAGCAAAACAAGAGCTATGCCTACGATAAGGAAGTGCCGAACAGCAAGAAAGCGATTTTGCATTATCGGCTCATAGCCCGGTCGCAGAACTATTATCTGCTGGAAATAGACCTGAAAACGGGGCGGCATCATCAGATACGCTGTCAGTTGGCAAAAATGGGATGTCCCATTAAGGGAGATTTGAAGTACGGTTCTCCCCGTTCCAATCCCGACGGAAGCATTTGTCTGCATGCGCGCTTTGTGCGCTTTGTACATCCGGTATCCAAGAAACTGATAGAGGTGGAAGCCCCTGTCCCTGCCGGTAATCTATGGAATGGCTTTGAAATGGTTTGA
PROTEIN sequence
Length: 224
MTVVYEDNHIIIVNKTASEIVQGDKTGDTPLSETVKLYLKEKYQKPGNVFIGVTHRLDRPVSGLVVFAKTSKALARLNEMFRNSEVKKTYWAVVKNRPRESEGELVNYLVRNEKQNKSYAYDKEVPNSKKAILHYRLIARSQNYYLLEIDLKTGRHHQIRCQLAKMGCPIKGDLKYGSPRSNPDGSICLHARFVRFVHPVSKKLIEVEAPVPAGNLWNGFEMV*