ggKbase home page

L1_008_000G1_scaffold_4_2

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 2199..2483

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase omega chain (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 191
  • Evalue 1.00e-46
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 191
  • Evalue 5.10e-46
DNA-directed RNA polymerase subunit omega n=4 Tax=Bifidobacterium dentium RepID=D2Q9C0_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 191
  • Evalue 3.60e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGCATTCGGCACTCAGCCAACCCCGACCGGACTTGCGGATCCGCCGATCGACGATCTGATGGAGCATGCGGACTCCAAGTACGCCTTGGCTATTTTCGCCGCCAAGCGTGCTCGCCAGATCAATTCCTACTTTACCCAGCTCAATGAGGGTCTGCTGCAGAACGTCGGCCCGCTGGTGGAGTACCAGAATCAGGAAAAGCCGTTGTCCATCGCGTTCCGCGAGATCAACGATGGTCTGCTGGAGGAGACCCTCGGCGAGGACGACCTGACCGAAGGCAACTGA
PROTEIN sequence
Length: 95
MAFGTQPTPTGLADPPIDDLMEHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLVEYQNQEKPLSIAFREINDGLLEETLGEDDLTEGN*