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L1_008_000G1_scaffold_608_12

Organism: L1_008_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: 12177..12494

Top 3 Functional Annotations

Value Algorithm Source
Putative type III secretion effector protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4K5R7_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 104.0
  • Bit_score: 146
  • Evalue 8.80e-33
type III secretion effector protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 214
  • Evalue 1.30e-53
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 216
  • Evalue 1.30e-53

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGACTTCAGCCTCGTTTAATTCTTCCCCAAACGGTCCCATCGACCTGTTGCGCAGTACCCAACGTACAAGTCCACCAGTATCCAAGGAGCGCGGCCCCTCGCGTAGCTTCCCTTTTGCGTCGACGGAATATGAGGCAGAAGCACGGCGTATGAAGGCTTATGCCGGCGAGCGTAGATTCCAGGCGCCCGTGTCGGACGACTTTTCCCGGGGCATGCTGGCAGACCCGCAGGTCAGGGGGGAGGGCGCCGATTCGTTGAACGACACGGGGTTGATCAATTGCCTGGCAGGCTGGTGGCGTAGGCGCAAGCTGGGTTAA
PROTEIN sequence
Length: 106
MTSASFNSSPNGPIDLLRSTQRTSPPVSKERGPSRSFPFASTEYEAEARRMKAYAGERRFQAPVSDDFSRGMLADPQVRGEGADSLNDTGLINCLAGWWRRRKLG*