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L1_008_000G1_scaffold_118_7

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 5512..6366

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9U8_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 284.0
  • Bit_score: 542
  • Evalue 1.50e-151
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 551
  • Evalue 5.90e-154
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 98.2
  • Coverage: 284.0
  • Bit_score: 542
  • Evalue 4.20e-152

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGCCTAAACCTGAAGCTAACGAGGCAGTACAGGCATCTGCAGAAGAGCAGAAAGCCGCAAGAAGAGCTGCTCGCCGTGCTTCTAAAGGTACCCCGGCCTGGGATAAAGATAGAACACGAAAGCTCTTTGCCCAATATAAAGAAACAAAAGACCCTGAGGTAAGAGACCAGCTTATCGTGAGTCACTTAAACCTCGTGCGCTTTTTGGCCTCCAAGTTTAAAAACCGTGGAGAACCTCTTGATGATTTGATTCAGGTGGGAACCATTGGACTTATCAAGGCAATTGATAGGTTTGAGCCTGATCGTGGTCTTGAATTTACAACATATGCAACGCCAACCATCATGGGAGAAATCAAGCGTCACTTCCGCGATAAAGGCTGGTCAGTACGTGTTCCTCGTCGTTTGCAGGAGCTTTCGTCCAAGATTAATCAGGTCACTGATGATTTGACTAAAGAGCTGCAAAGAAGCCCTTCAATTGAAGAGATCGCCCAGCGCCTTGATACTAACGTTGAAGAGGTTCTTGAGGCTATGGAGTCTTCTAGCGCTTATAGCTCTGTTCCTCTTGAGGGAGGCGGCTCTGGTGCTGATGGCGACGAGACTCCTTCAATCATTGATCAGTATGTGACCGAAGATGAGGATCTTGCTGGTTCTGATGACCGCATTGTTCTTGAAGAGGCCATTAGAGACTTCTCGCCACGAGAGCAAGAGATTATTCGTATGCGTTTTGTTGAAGGTCTTACTCAGGTAGAGATTGCGGAGAAACTTAATATCTCTCAGGTACAGGTTTCAAGGCTGCTTCGTCGCACCTTAAAGCGTATCCAAGAAAAGATTGACCCAGAAAGCGTGAATCGTTAA
PROTEIN sequence
Length: 285
MPKPEANEAVQASAEEQKAARRAARRASKGTPAWDKDRTRKLFAQYKETKDPEVRDQLIVSHLNLVRFLASKFKNRGEPLDDLIQVGTIGLIKAIDRFEPDRGLEFTTYATPTIMGEIKRHFRDKGWSVRVPRRLQELSSKINQVTDDLTKELQRSPSIEEIAQRLDTNVEEVLEAMESSSAYSSVPLEGGGSGADGDETPSIIDQYVTEDEDLAGSDDRIVLEEAIRDFSPREQEIIRMRFVEGLTQVEIAEKLNISQVQVSRLLRRTLKRIQEKIDPESVNR*