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L1_008_000G1_scaffold_118_30

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 28229..29212

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 327.0
  • Bit_score: 654
  • Evalue 4.40e-185
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9X1_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 327.0
  • Bit_score: 649
  • Evalue 1.00e-183
S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 327.0
  • Bit_score: 649
  • Evalue 2.80e-184

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGAAGGCAGAAGACGGTAACTTGAAAGTCGAATATCGGCACCAACCAGTAATGCTTGCAGAAGTGCTGCGCGAGCTGGATCCCAAGCCAGGTGAAGTTGTTTGCGACTGCACCTTGGGAGGAGCGGGTCACACCGTAGAGATGGCAAAGCTGATTGCTCCAGATGGTCTTTCCATTGGAATTGACCAGGACGCAATGGCTCATCAAGCAGCAGCTGCTCGCCTGAAGCAAGAAGTACCAAACGCGGAGTTTTTGCCGCTTAAGGGAAACTTTGGCGACCTCGATGAACTTCTCGTCTCCGCAGAAGTCCCCGGAGTTGACTGTTTCCTTTTTGACATTGGTGTTTCTTCTCCTCAGCTTGATATCCCAGAGCGAGGCTTTTCGTACCACGAAGACGCCCCGTTGGATATGCGAATGGACCCGGGCAAACAAACTCCAACTGCACAAGAGGTCATCAACACCTATAACGAAGCCGACCTCGCCCGAATCCTTCGAATTTACGGAGACGAGAAATTTGCTTCCCGCATTGCACGACGCATTGTGCAAACGCGAGAAAAGCGTCCCATCCAAACGACGCTTGAACTTGTTGAGGTAATCAAGGCGGCAATTCCCGCAGCAGCACGTCGTCACGGCGGTCATCCTGCCAGAAAGACGTTCCAAGCACTTCGTATTGAAGTGAACCACGAACTTGAGGTTTTGGAACGCGGACTTCGTTCTGCTATTGCCTGGGCTAATCCAGGAGGCAGGATTTGCGTTATCTCGTATCACTCGCTTGAAGATCGCATTGTCAAGCACGTGTTCTCCGAGCTCAGCCAAGGTTGTATCTGCCCGCCAGACCTTCCGGTTTGTATGTGCGGTCAAGTGCCGATAGTTGACGTGATTACGCGCAAACCTCTTGTGGCAACTCCAGAAGAGATTGAGCGCAACCCAAGGGCGAGAAGTGCCCTGATGAGGGTAGCGGTTAAACGCGACCCAGAGAAATGA
PROTEIN sequence
Length: 328
VKAEDGNLKVEYRHQPVMLAEVLRELDPKPGEVVCDCTLGGAGHTVEMAKLIAPDGLSIGIDQDAMAHQAAAARLKQEVPNAEFLPLKGNFGDLDELLVSAEVPGVDCFLFDIGVSSPQLDIPERGFSYHEDAPLDMRMDPGKQTPTAQEVINTYNEADLARILRIYGDEKFASRIARRIVQTREKRPIQTTLELVEVIKAAIPAAARRHGGHPARKTFQALRIEVNHELEVLERGLRSAIAWANPGGRICVISYHSLEDRIVKHVFSELSQGCICPPDLPVCMCGQVPIVDVITRKPLVATPEEIERNPRARSALMRVAVKRDPEK*