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L1_008_000G1_scaffold_118_81

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 91871..93976

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 701.0
  • Bit_score: 1352
  • Evalue 0.0
Transcription termination factor Rho n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WA24_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 701.0
  • Bit_score: 1254
  • Evalue 0.0
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 701.0
  • Bit_score: 1254
  • Evalue 0.0

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2106
ATGTCGGACGAAACATCTTCGGTCCAAAATGATTCTTTAAATGATGTAGAAAATACTCCAGCACCACGTAGACGTGGTAGACCTCGTAAGAGTGAAAATAGTAATTCAGAAAATTCAACTTCAGAAAATACCAATTCTGAGGCAACTGAAGAAAAGGCCTCTAATTCATCTGCTGCAAAGCGTCGTCGTGGTCGTCCAACTAAAAAAGAGACTGAGGCACGTCGTGCGGTAGAGGCTGTTGTGGCAGAGGCTATGAACGCAGCTGGCATTGCAGAGCCTCCTAAACGTCGCCGCGGCCGTCCTAGCAAAGAAGAGATGGAAGAGCGTGCTCTTCACGAGCGTGCCCTTGAAGTTGCACAGGCAGAGGTCCTGGCTCAGGTCCAGGCAGGCGGCAAGGTTTCTTCTGACGTTGTAGACACTGATCGCCTTACCAAGATTGTTCAGGACGCAACTCAGCCTTCTGCAGAGGTAACTCCGGCTCCTGCCTTCACTAAAGCAGAGGCAGAGGGTGTGGCTGGCCAGAATGACAATGCGGCTCAGAAGAACTTTGCTGAAGAGCAGGGTAGTGTTGAGCAGCAGAATGGTGCAGCTCAGGAGCAGGCTTCTGGTGCAGTAGCAGATTCCGATGCAGCTCCAGCAGAGCGTCCAGGGCGTTCTCGTACGAGTGTAGCACGTCGTCGACATCGTAATGCCGAGCTAAAAGAAGCGGCTCAGGAGGGCGAGAAGACACAGGAAAACGCACACGCCAACAACCAGGAGCGTCCTTCTCGCGATCGTAGACAGAACAACCAGCGCAACAAGAATCGCAAGCAGGGCCAGGCAAGCGAGCCATCGCTTTCCAAAGAGGCTCTGCAAGAGATGAAGCTTTCTGAGCTTCGTGCTAAAGCAACTGAGCTGGGCATTGAGTACGCAGGCGTTCATAAGTCTGATTTGATTGAGCTTGTATACGCTGCATCTGCAGCTGCTGAGGGCTTTAAGACTGTTGAGGGTATTCTTCAGATTAGCAACGAAGGCTACGGCTGGATTCGTACAGGTAATTACATGGAAGGTGATGACGACGCCTTTGTCCACCAGCAGATTATTAGAAATCTTGGTCTGCGCCCGGGTGATAGCGTCTTGGGCATGGTGGGACCTGCTCGCGTAAATAGCAAATATCCACCACTGCTTAAGGTTACCCAGGTCAACGGTGGGGAAGTTGAGGGTCTTAAGGACCGTCCTCGCTTCAAAGATCTGACTCCAATTTTCCCAGACCAGCCTCTTACTATGGAGCACGGTAAAGATTCCATTACGGGCCGTGCAATTGATCTGGTGGCTCCTATTGGTAAGGGTCAGCGTGGTTTGATTGTTTCGCCTCCAAAGGCAGGTAAGACCACCATTTTGAAGCGCATTTGCCAGTCTATTACCACCAACAATCCTGAGGTTCACCTCTTCTGCCTCTTGGTAGACGAGCGCCCTGAGGAAGTTACAGACATGGAGCGCTCAATTAAGGGCACCGTTGTTGCTTCAACTTTTGATATGCCAGCAGAGAATCACACCGTTGTCTCGGAGCTTGTCATTGAGCGAGCAAAGCGTCTGGTTGAGATGGGTCAGGACGTTGTGGTTATTCTGGACTCCATCACACGTCTTGCTCGTGCATACAACCTGGCTATTCCTGCTTCTGGTCGTATTCTTTCTGGTGGTGTTGACTCCGCCGCTCTGTATCCACCAAAGAAGTTCTTGGGTGCAGCTCGAAACATCGAGAACGGCGGCTCGCTCACTATTATTGCGTCTGCCCTGGTAGATACAGGCTCCAAGATGGATGAAGTTATCTTCGAGGAGTTCAAGGGTACTGGTAACATGGAGCTCAAGCTTGATCGAGATCTGGCAGATCGCCGTATCTTCCCAGCTATTGATCCTGTTTCTTCTGGTACTCGTAATGAGGATCTGCTTATTAAGCCAGAGCTTCAGCCTATGGTATGGGGCGTTCGCCGTATTCTTGCAGGCTTCAACAACACTGAGCGTGCAACTACTGCTCTTATCAGTGGTCTTAAGCAGACCGACAATAACCAGGACTTCCTGATTAGATCTGCAAAGAAGGCTGCACAGTCTGACTATCCACAGAATTAG
PROTEIN sequence
Length: 702
MSDETSSVQNDSLNDVENTPAPRRRGRPRKSENSNSENSTSENTNSEATEEKASNSSAAKRRRGRPTKKETEARRAVEAVVAEAMNAAGIAEPPKRRRGRPSKEEMEERALHERALEVAQAEVLAQVQAGGKVSSDVVDTDRLTKIVQDATQPSAEVTPAPAFTKAEAEGVAGQNDNAAQKNFAEEQGSVEQQNGAAQEQASGAVADSDAAPAERPGRSRTSVARRRHRNAELKEAAQEGEKTQENAHANNQERPSRDRRQNNQRNKNRKQGQASEPSLSKEALQEMKLSELRAKATELGIEYAGVHKSDLIELVYAASAAAEGFKTVEGILQISNEGYGWIRTGNYMEGDDDAFVHQQIIRNLGLRPGDSVLGMVGPARVNSKYPPLLKVTQVNGGEVEGLKDRPRFKDLTPIFPDQPLTMEHGKDSITGRAIDLVAPIGKGQRGLIVSPPKAGKTTILKRICQSITTNNPEVHLFCLLVDERPEEVTDMERSIKGTVVASTFDMPAENHTVVSELVIERAKRLVEMGQDVVVILDSITRLARAYNLAIPASGRILSGGVDSAALYPPKKFLGAARNIENGGSLTIIASALVDTGSKMDEVIFEEFKGTGNMELKLDRDLADRRIFPAIDPVSSGTRNEDLLIKPELQPMVWGVRRILAGFNNTERATTALISGLKQTDNNQDFLIRSAKKAAQSDYPQN*