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L1_008_000G1_scaffold_16_10

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 14752..15294

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 180.0
  • Bit_score: 371
  • Evalue 4.10e-100
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 180.0
  • Bit_score: 367
  • Evalue 1.50e-99
Peptide deformylase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W757_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 180.0
  • Bit_score: 367
  • Evalue 5.40e-99

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAGTTCTGAAGCTGATGATATGGTACTTTGGCCAGACCCTCGTCTGAGCCAAGAGTGCGAAGAGATTGACGATATTAACGACGATGTTCGCAAGATGGCCGAGCATATGCTCAAGGTTATGTATGCCACCGACGGCGTTGGTCTTGCTGGACCTCAGGTTGGCTATATGAAACGCATGGTAGTCATTGATGTTGACTACCCTAATGGCCAAGAGAACCCTTTTGTGCTCATTAATCCAGAGATTAAAGTTGCAGATGGTGAGCCTCGTGTATATGAAGAGGGCTGCCTTTCGTTCCCAGGCATTACCGTTCCTGTTACACGCCCAAGCCACGTTGTCGTTCACGCATATAACCTCGATGGCGATCTTATGCGCTATGAAGCAGAAGGAGACCTTCTCGCCGTTTGTCTGCAGCATGAGATTGACCACATTAATGGCGTAACCATGCCTGACCACCTGGGACCAGGTGCTCGTATGGAGACACTGCAGGAGTACAAAGAGGCACTGGCTTCTGGCGCTCGTCCTGGTCAGACAGACTATTAG
PROTEIN sequence
Length: 181
MSSEADDMVLWPDPRLSQECEEIDDINDDVRKMAEHMLKVMYATDGVGLAGPQVGYMKRMVVIDVDYPNGQENPFVLINPEIKVADGEPRVYEEGCLSFPGITVPVTRPSHVVVHAYNLDGDLMRYEAEGDLLAVCLQHEIDHINGVTMPDHLGPGARMETLQEYKEALASGARPGQTDY*