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L1_008_000G1_scaffold_16_48

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 63743..65110

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W713_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 455.0
  • Bit_score: 858
  • Evalue 2.00e-246
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 455.0
  • Bit_score: 867
  • Evalue 5.90e-249
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 455.0
  • Bit_score: 858
  • Evalue 5.60e-247

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
GTGGCTGCAAAAAAGGCAAATGACGAGGTCAAACTCTCAGATGAGCTTACTAAAATTGTTGATGATCTGGTAAGTTCTTCAAAGTCTAACGGTAGTATCAGCGAAGACGATATTCAGGTTGCCATTCGTGACGTTGACGTTAACGATGATGAGCTTTCTGATCTGTACGATTCGCTGCGTGTTAAAGGTGTAGAGATTACTACCGCATCTGAAGCAACCGTTTCTTTCGCCATTGAAGATGACGCCGTAGAGGATGATTTTTCATCCGATGATGACATGGATGACTCATCTGATTTTGAAGATGAAGATGATGAAGATTTTGATGCCGTAAATGAGGCACGTGAGGTCAAAGAGGCTCTCCGCTCTGTTTCTAAGGCAAAAGTCTCTAAGCCAAAACGTTCTTCTCGCGCTCGTGCTCGTCGCTCAGATACCACTACGGTTATGCTTACCGGCGATCCTGTCCGCATGTATCTTAAAGAGATTGGTAAGGTTGACCTGCTTACTGCATCAGAAGAGGTTCACCTTGCTATGAAGATTGAGGCAGGTACTGCAGCTTCTCAGAAGCTGGAGGACTTTGAGGATGGCCTCATCGAGCTTAACCGCGCAGAGCAGCGCCGCCTTATGCGTATTGAGTCTGTAGGACTTGATGCTAAGCAGCAGCTTATTTCTGCAAACCTTCGTCTTGTTGTCTCGATTGCAAAGCGCTATGTTGGCCGCGGTATGCTGTTCCTTGACCTTATCCAGGAAGGTAACCTGGGCCTTATTCGCGCTGTCGAGAAGTTCGATTACACCAAGGGCTTTAAGTTCTCAACATATGCTACCTGGTGGATTCGTCAGGCAATTACCCGTGCTATTGCAGACCAGGCACGTACTATTCGTATTCCTGTCCACATGGTAGAGACAATCAACAAGCTGATCCGTGTTCAGCGTCAGCTTCTGCAAGATCTTGGTAGAGATCCTACCCCAGAAGAGATTGGCGCAGAAATGGGTATGTCTCCTGATCGCGTTCGCGAAATCCAGAAGATTAGCCAGGAGCCTGTCTCTCTTGAGACGCCTATTGGTGAAGAAGAAGATTCGCAGCTTGGAGACTTTATTGAGGATTCTTCAGCTGTTGCTCCACCAGATGCAGCTTCTGATTCAATGCTTCGTGAGCAGCTTGAGCAGGTTCTTGACGGCCTTGCTGACCGTGAGCGTAAGGTTATTAAGTTCCGCTTTGGTCTTGAGGATGGCCACCCTCGCACCCTTGAAGAGGTAGGCAAGGAGTTTGGAGTTACGCGCGAGCGTATTCGCCAGATTGAGTCCAAGACCTTGGCAAAGCTTCGTCATCCTTCTAGGTCCGGCCGTCTTAAGGACTATATGGAGGAGTAG
PROTEIN sequence
Length: 456
VAAKKANDEVKLSDELTKIVDDLVSSSKSNGSISEDDIQVAIRDVDVNDDELSDLYDSLRVKGVEITTASEATVSFAIEDDAVEDDFSSDDDMDDSSDFEDEDDEDFDAVNEAREVKEALRSVSKAKVSKPKRSSRARARRSDTTTVMLTGDPVRMYLKEIGKVDLLTASEEVHLAMKIEAGTAASQKLEDFEDGLIELNRAEQRRLMRIESVGLDAKQQLISANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPTPEEIGAEMGMSPDRVREIQKISQEPVSLETPIGEEEDSQLGDFIEDSSAVAPPDAASDSMLREQLEQVLDGLADRERKVIKFRFGLEDGHPRTLEEVGKEFGVTRERIRQIESKTLAKLRHPSRSGRLKDYMEE*