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L1_008_000G1_scaffold_16_87

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 108566..110074

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W6X4_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 501.0
  • Bit_score: 929
  • Evalue 1.30e-267
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC95497.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 501.0
  • Bit_score: 973
  • Evalue 1.10e-280
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 501.0
  • Bit_score: 929
  • Evalue 3.70e-268

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGCCACGCCCTCGTTTTAGTGAGATGCTCGTAGAACGTAGACGTCAGCTCGGGCTTTCTATCACTCAAGCATCAAAGATTCTTCGCCTCAAGGAGCAGGCACTTATTGCTTTTGAGGAAGGCGATTTTACGAATATGCCTCAGAGTGGTTATGCTCAGGGCATGCTTTCTTCGTATGCTCGCTACCTAGGACTTAATCCGCGTGAGATTGTAGACCTCTTCCAGGAGGAGAGCTACGAATTTGAAAACGGCACCTATTCTCATGAGTTGCGTCGCCGTACCCGCGATACTCAGTCTGGTCGTGGCATTGCTGGTTATGACGTCGTAAACGAGTCCGGTAGCAGGCCAAAGGCATACGTACAGTACCACGGTCTTCTCCCCACATCGGGAGGACCAGCTGGCGATATGGGTGCGTTTGCAACTACGTCTGGTGTTCGCTCCAGACAAACTGGCGTGCCTCTGCGTGCACAGGCATCTGAGGAGGATGCTGGCGGCTACTCGTATTCTCGCTATGCCACAGGTCATGCATACAATGCTGGTATTGAAGAAGCTTCTCGTCAGAAAACCATGGCAAGTCGTACGCGTGGTGGCGTTCAGCGTAGACGTGTAGGTATTGCGGGCGTTAGCATGCCAGCTTACAAAGACGATGTAACCAGAAGAACTGTTGCTCCAAGCGATTACACCGATGACCTTCGTTATGACAATGTAACTGCTCCTTACGAGCGCGCATCTACTATTTCCGGTCGTCGTGGTTCAAGAAATATCGCACAGGTAGATAGGCCTAATGTTCGTCGTCGCCAGCCTTCTGGCGCTGCTGCTCAGCAACGCCGTGCTCCTCAAAGACCAGGCGTTATGGGAGCACTCCAGAATTACTTCTCTGACACAGGACGCACTATTGCTACCGTGTTTGCTCTTGTTGTTGTGATTATTACTGCCGTTTTGCTGTTCAGCGTTCGTTCCTGCATGACAGCTCGTACTACGCCTACTACAACTAAGACAGTAAGCGTTAATAATTCAACAACTGATTCTTCAAAGAATTCCACTACTACAAATAGCAACACGGACACTTCTAAGAAGGATTCAACTGATGCTTCTAAGAGCACCACTACAACTGAGCCTAAGAAGGAAGAGACTCCTAAGCAGACTACCGTAGTGGTTACTGTTGCAGACGGTCAGACCAGTTGGGTTGAGATTACTGTTGATGGTAAGAGTGTTGAGGCCGATGCAATTACTGGTCCATGGTCTCAGACATACACCGTCACTGATTCCATGAACGTTCTTGCAGGTACACCTGGTGCTGTTGCGGTTACCGTTAATGGCACTGCTAAGCCATTTGACGCAAATGCTTCTGGTATTGGTACCTTGACTATTCAGGGAACTAAGCCTGCTGACGGTACTGCAGCAAATGCTTCTGGAACTCAAACAAACAGCACGTCAACAAGTACTACCGGTGGAACTTCTGGCACAGCTAACAACCAGAATTCCAACAGCAATTCAAACAATAACTAA
PROTEIN sequence
Length: 503
MPRPRFSEMLVERRRQLGLSITQASKILRLKEQALIAFEEGDFTNMPQSGYAQGMLSSYARYLGLNPREIVDLFQEESYEFENGTYSHELRRRTRDTQSGRGIAGYDVVNESGSRPKAYVQYHGLLPTSGGPAGDMGAFATTSGVRSRQTGVPLRAQASEEDAGGYSYSRYATGHAYNAGIEEASRQKTMASRTRGGVQRRRVGIAGVSMPAYKDDVTRRTVAPSDYTDDLRYDNVTAPYERASTISGRRGSRNIAQVDRPNVRRRQPSGAAAQQRRAPQRPGVMGALQNYFSDTGRTIATVFALVVVIITAVLLFSVRSCMTARTTPTTTKTVSVNNSTTDSSKNSTTTNSNTDTSKKDSTDASKSTTTTEPKKEETPKQTTVVVTVADGQTSWVEITVDGKSVEADAITGPWSQTYTVTDSMNVLAGTPGAVAVTVNGTAKPFDANASGIGTLTIQGTKPADGTAANASGTQTNSTSTSTTGGTSGTANNQNSNSNSNNN*