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L1_008_000G1_scaffold_16_89

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 110586..111992

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 468.0
  • Bit_score: 934
  • Evalue 5.30e-269
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W6X2_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 468.0
  • Bit_score: 907
  • Evalue 2.90e-261
MiaB-like tRNA modifying protein YliG similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 468.0
  • Bit_score: 907
  • Evalue 8.20e-262

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGGCCAGCCCCTCCAGTTCAATAACTATCGATAGGGGCTACAACGTCCTATACATCACGTTAGGATGCGCTAAAAACGAGGTTGATACAGACCGCATGCGTGCGCGTCTTTTGGCCTCTGGTTTTGGTGAAGTTGCCGATCCAGACTCAGCAGACATAGCAATTATCAACACCTGTTCATTCTTGGCTTCAGCAACAGAGGAGTCCATTGAAGCTACGCTTGAGATTGCTGAGGGCGCTTCCGAGGGAGTCCGTAAGCTGCCCATTATTATGTGTGGCTGCGTTCCTTCCAGGTATGGCGCAGAGCTTAACGAGCAGCTTCCTGAAGTTGCTGCGTTTGTTCCGGCAGATCAAGAAGATGGTATTGTCAGCGTTGTTGCAGACGTTCTGAATATCCCTGAGCCTACGCAGTCAATTGTTGCTGCCCATGGAATGCTGCGCACCATTGATGGCGCCAGTGCATTTGTAAAGATTTCCGAGGGCTGTGATAGATTCTGTGCCTTCTGCGCCATTCCGTACATTCGTGGTCACTATCACTCAAGGCCTGCTGAAGAGATTCTTCAAGAGGTACATGAGCTGATGGAAGGTGGTGTTCGTGAGGTCATTCTGATTGGCCAGGACACCGGTATCTGGGGCTCGGATATGCCTGATACAGCAGATGGTCAGACTCCAACGCTTGCCAAGCTTATGCAGCAGGTTGCTGAGGTAGTTCGTCCTTATAAGGGATGGATTCGCGTTTTGTATCTGCAGCCAGAAGGTATGACCGATGAGCTCATCAGCACCATTCGCGATACACCTGAGGTTCTTCCTTACATTGATATTCCAATTCAGCACTGCAACGAGCGCATTCTTAAGCGCATGGGTCGTTCTGGCTCTACACAGGAGCTTCGTGAGCTTTTTGATCGCCTCAGAACTGAGATTCCTGGCATGGTTCTTCGAACTACGGGAATGTGTGGCTTCCCAGGCGAGACAGATGATGAATCAGATGAGCTCTACGACTTTATTCAGGAGCAGGAGTTTGATTACACTTCCGTCTTTACCTATTCGCCAGAAGAGGGAACTCTGGGCGCAAAGATGTCTGATCAGGTTCCAGACGAGGTAAAAATTGAGCGTACTCAGCGCTTGCTTGACCTTGTAGAGCAGCTTGGCTTTGCGGCAACTGCCCGTCACGTTGGCGAGCGCTGCGAGGTCATTATTGACGGAATTGAAGAATCTGACGAGGGCACTGAGCTTATCGGCCACACGTGGTTCCAGGCTCCAGACTGTGATGGCGCTGTTCACATTGCAGAGGGAGAGGCCGCAGTCGGAGATATTGTCCTTTGTGACCTGGTAGATTCATTCTGCTATGAAATGATTGGCGAAATTGTAGACACTACAGACACACAGTCTGGCGAGAAAACCGCTTAG
PROTEIN sequence
Length: 469
MASPSSSITIDRGYNVLYITLGCAKNEVDTDRMRARLLASGFGEVADPDSADIAIINTCSFLASATEESIEATLEIAEGASEGVRKLPIIMCGCVPSRYGAELNEQLPEVAAFVPADQEDGIVSVVADVLNIPEPTQSIVAAHGMLRTIDGASAFVKISEGCDRFCAFCAIPYIRGHYHSRPAEEILQEVHELMEGGVREVILIGQDTGIWGSDMPDTADGQTPTLAKLMQQVAEVVRPYKGWIRVLYLQPEGMTDELISTIRDTPEVLPYIDIPIQHCNERILKRMGRSGSTQELRELFDRLRTEIPGMVLRTTGMCGFPGETDDESDELYDFIQEQEFDYTSVFTYSPEEGTLGAKMSDQVPDEVKIERTQRLLDLVEQLGFAATARHVGERCEVIIDGIEESDEGTELIGHTWFQAPDCDGAVHIAEGEAAVGDIVLCDLVDSFCYEMIGEIVDTTDTQSGEKTA*