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L1_008_000G1_scaffold_16_148

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(171969..172808)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 279.0
  • Bit_score: 535
  • Evalue 4.30e-149
Pseudouridine synthase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAL4_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 279.0
  • Bit_score: 533
  • Evalue 1.20e-148
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 279.0
  • Bit_score: 533
  • Evalue 3.30e-149

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGGCAGAAGAGCGTATTGTTTCTATGCGTCTGCAGCGCTTTTTGGCGCGCGCGGGAGTGGCTAGCCGTCGTGGCTCTGAGCGCCTGATGACCTCAGGTCGCGTCACGGTAAACGGCCAGGTAGTCACCGAGCTTGGCAGCAAGGTTAATCCGCTGGTGGATGTTGTTGCAGTTGATGGCATTGTCTGTTCAATTGCCGAGAAACCCGTCTACTTGATGCTCAACAAACCTGCAGGGTACCTGACTACTATGAAAGACCCTCAGGGTAGACCAACCATTGTGGACATGGTGCCAACTGACACATACCCTGGTCTTTTTCCTGTTGGACGTCTTGATATGGATACCACAGGCCTTCTGTTCTTTACCACCGATGGTCAGATGGCACAAGAGCTCTTGCATCCTTCAAAGCATGTATGGAAGCACTATGTTGCCCATGTAGTAGGAACACCTACAGAAGAGCAGCTAGATCGTCTGCGTGAGGGCATTGAGCTTGAAGATGGACCTGCGGCTCCAGCAGAGGTAGAGATTATCTCTGACAACGCCAAGATGAAGGCCCTTCTCGCCCCACAGGGTTTAGGAAAAACCGGTGGAGGAGAGCCAAACTCCCTGGTCAGCGTAACTATTAGGGAAGGCAGAAAGCATCAGGTCAAGAAGATGCTTTTGGCCATTCACCACAGGGTTCTTGCGCTCCACAGAGATACGTTTGGTCCGCTGCACTTAACAGGCGTTAAAGAAGGCGAGTGGAGACTTCTTACAGAAGAAGAAGTTGCTGCTCTGGAGCGCACTATTGGCAGAGAGCCTGGTGCTTCTCCCATCATGCCTTTGAACACCGACAAGTAA
PROTEIN sequence
Length: 280
VAEERIVSMRLQRFLARAGVASRRGSERLMTSGRVTVNGQVVTELGSKVNPLVDVVAVDGIVCSIAEKPVYLMLNKPAGYLTTMKDPQGRPTIVDMVPTDTYPGLFPVGRLDMDTTGLLFFTTDGQMAQELLHPSKHVWKHYVAHVVGTPTEEQLDRLREGIELEDGPAAPAEVEIISDNAKMKALLAPQGLGKTGGGEPNSLVSVTIREGRKHQVKKMLLAIHHRVLALHRDTFGPLHLTGVKEGEWRLLTEEEVAALERTIGREPGASPIMPLNTDK*