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L1_008_000G1_scaffold_16_161

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(186270..187457)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 395.0
  • Bit_score: 775
  • Evalue 3.50e-221
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 395.0
  • Bit_score: 740
  • Evalue 1.50e-211
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAK2_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 395.0
  • Bit_score: 740
  • Evalue 5.20e-211

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
TTGAGCATTTTTGAAGACACTGCGCCTCGTGCTGTAAGGCATGAGCCTTTACGTGTTGCTGTCCTTGGAGCTTCGGGCTCTGTGGGCATGCAGACGCTTGATGTATGCCGTCATTTCCCGCAAAAGGTGCAGGTAGTTGCCCTTGCGGTGAGGTCGTCGGCTGAGTTTGCCGTGAAGGCAGCAAATGAGTTCAACTGCAAATATGTTGCTTTTGCCGATACAAGTGTCAAGGGCAACGTTCTTCTCGACGCACTGCCTCAAGGCTGCAAGGCAAGCTTTGGTCCCGAGGCAGTTCAGGCGCTTGCGGAGCTGGACGAGGTTGACTGCGTGGTCAACGCAGTGGTGGGAGAGGCTGGCATTTACGCTGGTCTTGCCGCTGTAAAGGCTGGCAAGGTGCTGGCATACGCCAACAAGGAGTCCATTGTTGTTGGCGGAGACCTCCTGATGCCTCTGGTCAAGCCTGGTCAGCTCATCCCCGTTGATTCTGAGCACAGCGCCATCTTCCAGTGCCTTATTGGCGAGAACCCTGCTGATATTCAGAGGATTTGGCTGACCTGCTCTGGTGGTCCGTTCTTCGGATATTCTCGCGAGCAGCTCAAACACGTTTCGGCCGACGACGCCTTGGCACATCCAACCTGGAAGATGGGTGCCAAGATTACCATCGACTGCGCAACGCTCATGAACAAGGGCCTTGAGCTCATTGAAGCTCATCATCTCTTTGATACTCCAATGGACAAGCTTGAGGTGCTGGTGCATCGTCAGAGCCGCATCCACTCTATGGTTGAGTTTGTGGACGGTTCCGTAAAGGCGCAGCTTGGAGCCTCTGACATGAGGTTGCCAATCCAGTTTGCGCTGAGCTATCCGCACCGTTGGCCGGCAATCGCCAAGCCGGTTGAGTGGCAAGAGACAGCTCCTCTCACAGGAGATTATGCTGACGAGAAAACCTTTGGATGCCTAGCTCTTGCTCGCCACGCGGGAACTGTTGGTGGAACGCTTCCATGCATCATGAATGCTGCTAATGAAGTTGCTAACCATGCATTCAGGCGAGGAAGATGTTCATTTCTTGATATTGAGCGCATTGTTGCAGAGACCATGAATGCCTCTCATGTCCAAAGGGTAGAAGACCTTCAACAATTGACGCTTGTAGACGCAGAAGCACGAGCTTTAGCTCGTTCTTTTGTGGGATAG
PROTEIN sequence
Length: 396
LSIFEDTAPRAVRHEPLRVAVLGASGSVGMQTLDVCRHFPQKVQVVALAVRSSAEFAVKAANEFNCKYVAFADTSVKGNVLLDALPQGCKASFGPEAVQALAELDEVDCVVNAVVGEAGIYAGLAAVKAGKVLAYANKESIVVGGDLLMPLVKPGQLIPVDSEHSAIFQCLIGENPADIQRIWLTCSGGPFFGYSREQLKHVSADDALAHPTWKMGAKITIDCATLMNKGLELIEAHHLFDTPMDKLEVLVHRQSRIHSMVEFVDGSVKAQLGASDMRLPIQFALSYPHRWPAIAKPVEWQETAPLTGDYADEKTFGCLALARHAGTVGGTLPCIMNAANEVANHAFRRGRCSFLDIERIVAETMNASHVQRVEDLQQLTLVDAEARALARSFVG*