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L1_008_000G1_scaffold_16_182

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(208291..208812)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAI1_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 152.0
  • Bit_score: 280
  • Evalue 8.40e-73
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 173.0
  • Bit_score: 336
  • Evalue 1.40e-89
16S rRNA-processing protein similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 152.0
  • Bit_score: 280
  • Evalue 2.40e-73

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
TTGCGTAAACACTGGCGAGCAATTGCTCAAATTGTTAAAACGCATGGTAAAAGAGGGGAGGTTGTGACGGTTCCCGTTCACAGCCTTCCTTCTCTTATAGCTGAAGGCATGACAGTTGTTCCTGTTCCGCCTGCACTTAAAGGCCCAAGGCAGTTCTCAGTTGTCTCTGTTGAGTCAGATGACAGAGAAGGTAGTCTTGTAACTTTTGAAGACGTAACTACCATCTCAGACGCTGAAGAGCTTGTGGGTAAAACGCTTCTGGTAGAAGAAGATTGTCTTCCAGAAAACTTTGGTCTGGTAAATGTTTCTCTACTTGTGGGTAGAGAAGTACGTGATACAGAACATGGTTTTCTGGGTGAAATTACAGAAGTTCTTGTTGGACCTACACAAAATGTGTGGGTAATAGAGGGGCCTTTTGGACAGGTGCTGATGCCTGCCGTGGATGAATTTATCAAAGAGGCCCCAGCCGAGGGCTCCATTACCGTCTCAATTCCTCAGGGCCTTCTTAGGTTAGGTGAGTAG
PROTEIN sequence
Length: 174
LRKHWRAIAQIVKTHGKRGEVVTVPVHSLPSLIAEGMTVVPVPPALKGPRQFSVVSVESDDREGSLVTFEDVTTISDAEELVGKTLLVEEDCLPENFGLVNVSLLVGREVRDTEHGFLGEITEVLVGPTQNVWVIEGPFGQVLMPAVDEFIKEAPAEGSITVSIPQGLLRLGE*