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L1_008_000G1_scaffold_16_200

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(225959..226519)

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein MreD n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAG3_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 186.0
  • Bit_score: 343
  • Evalue 8.70e-92
Rod shape-determining protein MreD {ECO:0000313|EMBL:EWC95539.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 186.0
  • Bit_score: 362
  • Evalue 2.50e-97
rod shape-determining protein MreD similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 186.0
  • Bit_score: 343
  • Evalue 2.50e-92

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGCAGGTTTCTGATAGAAATAAAAACACACGCAGCATCACCGTTCTTGCTGTTGTTTGCTTCATTTTGCAGATTATGCTTACACCACAGGTTTCTTTTGGTGGGGGAGTCATCAATTTTGCACTTATTTTCTCGGCAGCTATTGCCCTAAGGTATGGTGGCAAAACTGGCGTGATATGCGGCTTTATTGCTGGTCTTATTTATGATTTGACTTCTGCTAACCCTATTGGCCTCATGGCACTCTTGCTTGTGGTCAGTTCTTATTTCATGGGCCAAGAGGTAAGAGACAGAATCTCTGGCAATTTTGGTACCTCTATGGGCTTTGTTGCCCTTCAAACTTTTGGTGTCACCTTTATGTATCAGCTCATTAATTCTTTGATTGGCTCTGGTGGCAACTTCTTTGAGGGGCTGCTGTTTAAGTCTTTCCCCACCATGTTGTTTACCATTTTGGCAGCTCTGCCTGTTTTCTATGTACTTTCTCATTCCCAAAGGTCTCATTCATCTTTGGGCGGAACTTCGCTCTACCGCGGATCTCATCGAGCTCCTCAGCGCCTTAAATAA
PROTEIN sequence
Length: 187
MQVSDRNKNTRSITVLAVVCFILQIMLTPQVSFGGGVINFALIFSAAIALRYGGKTGVICGFIAGLIYDLTSANPIGLMALLLVVSSYFMGQEVRDRISGNFGTSMGFVALQTFGVTFMYQLINSLIGSGGNFFEGLLFKSFPTMLFTILAALPVFYVLSHSQRSHSSLGGTSLYRGSHRAPQRLK*