ggKbase home page

L1_008_000G1_scaffold_81_20

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(19880..22393)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 837.0
  • Bit_score: 1686
  • Evalue 0.0
DNA topoisomerase type IA central domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7T0_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 837.0
  • Bit_score: 1668
  • Evalue 0.0
DNA topoisomerase type IA central domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 837.0
  • Bit_score: 1668
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2514
TTGATTCTAGTTGTTACCGAGAAAAACGACGCAGCGCAGCAGATTGCTCGCCTTCTGTCTGAATCGGGTAAGCCTGAGGCAGACAAGGTATACAACACTCCTGTTTATCGTTTTAGACGTGGCGGAGAAGACCATGTTGCCATTGGTCTTCGTGGCCATATTCTGCAGCCTGATTTTCCTTTAGCTCTCAAGTTTGATAAGGAAGAGGGTTGGTACGGAGAAACTGCAGAAGGGGAGCATCTTCCTGCAGACGTTCCAGATGGTCTTGAGCGTCCTCCTTACAAGGTTAAGCGTAAGCCTTTTATGGCAGATGGCGTTGACCTTAAGGGTTGGAAAATCCCTAGCTTGCCTTATTTGATTTGGGCTCCTGTAGATAAACAACCTGCAGAAAAAGAAATTATTCGAGCGCTCAAGAATCTTGCTAAGAAGGCAGAGTCTGTCATTATCGGTACAGACTTTGACCGCGAAGGTGAGCTTATTGGTTCTGATGCGCTTGCCCAGGTTCTCTCCGTTAATCCTAACCTGGCAGTGTTCCGTGCTCGCTACTCTGCTTTTACTAAGACAGAGATTGAAACCGCCTTCAATAAGCTGGTAGACCTTGATTACAACTTGGCTGCGGCGGGCGAGTCCAGACAGTATATCGACCTCATTTGGGGTGCTGTACTAACCCGTTATCTGACTACCGCACGTTTTGGCGGTTTGGGCAACACGCGCTCTGCTGGTCGTGTTCAGACTCCTACGCTGGCACTTGTTGTTGAGCGTGAGCGTGAGCGCCTTGCATTTAAGCCAGAAGACTATTGGGTTATTTCTGGCGTTGCTGCTCCAGAAGATGATGCGGAAGCAACCTTTAAGATGGTTCACCAGACCGCAAGATTCTGGGATCAGGCAGAAGCAGATGCAGCTTACGCCGTTGTTAAGGATCAAACGCAGGCAACGGTTGTCGAGATTGAGTCTCGTAGCAGAAAGCAGCAGCCACCAGCTCCATTTAACACTACGTCGCTGCAGGCGGCTGCAGCCGCAGAGGGTATCTCGCCAGCTAGAACTATGCGTTTGGCAGAGTCTCTGTACATGGATGGCTTGATTTCATACCCTCGTGTTGATAACACCGTTTATCCAAGTTCTCTTGACTTGAAGGACTGTGTCCGTACATTATCTGCAGTTCCTCAGTATGCTCCTACCTGCAAAAAGCTTTTGGGTCAGCCAAAGCTTCATGCTACTCGTGGCAAGCAGGAGTCTACTGACCACCCACCAATTTATCCAACGGCAGCAGCAAATCCAGATGCTTTGCAGCCTGCAGCTTGGAAGCTTTATAACTTAATTGCTCGTAGATTCCTTGCAACTCTTATGGGTCCGGCTACTATGAGCGGCACTAAGATCACGCTTGATGTTGCTGGTCAGCCCTTTGTTGCAAATGGAACCGTACTGGCTGAGCCAGGCTTTAGAGAGATTTATCCCTTTGGCCTTAAGAAAGACGATCAGATTCCTGATGTCGGTGAGGGAGAGATTGTCTCTATTCAGTCTTTGTCGCTTGACGCTAAGCAGACAGAGCCACCTGCTCGCTATAGCCAGGGCAAGCTTATTCAAGAGATGGAGAAGCGAGGCCTTGGTACAAAGTCCACGCGTGCCTCCATTATTGATACGCTTTACCAGCGTAAATACCTCAAGAATGATCCTGTTGAGCCAAGCCAGCTTGGTATGGCAATTGTTGATGCACTTTCGCAGTTTGCGCCACACATTACTTCGCCTGATATGACGGCAGAGCTTGAGTCCGATATGACAAGCGTTGCTGAGGGCAAAGATACGCGTGATGGCGTTGTTACACACTCAAGAGCCCTGCTTGCAGGCATGATTGATACGCTTATTGACCACAAAGAAGACCTGTCTGAGGCCATTGCTGATGCAGTTACTGCTGACGCAAAGGTGGGAACTTGCCCTAAGTGCGGCAAAGACTTGGTTGCTAAGAGCTCTCTGAAGACTCGTGGAAGCTTTGTTGGCTGCATGGGTTGGCCAGACTGCGATGTTACCTATCCACTGCCTCAGGGACGCGTTGAGCCGCTTGAGGGAGAGGCTGGTGTCTGCCCAGAGTGCGGTGCTCCTCGCGTAAAGGTTCAGCCGTTTAGACAGCGTGCGTATGAGACTTGCATTAATCCAGCTTGTCCTACAAACGCAGAGCCAGATCTTATTGTGGGTGAGTGTCCAACCTGCAAGGCCAATGGCAAGCACGGGGACCTGGTAGCTCATAAGTCAGAGCGTACGGGTAAGCGCTTTATTCGCTGCACCAACTACGAGGAGTGCGAGACCAGCTATCCTCTGCCTGCTCGTGGAAAGCTCGAGAAGACCGATGAAGTCTGTCCAGATTGCGGCGCTCCTATGGTGGTTGTTACTACTCAGCGTGGTCCTTGGAAGCTCTGTCCAAACTACGATTGCCCTGGTAAAGAAAAGAAAACTGCCTCGCGTAGAGGCGCTCGTAAGAGTACTAAGAGCACCAAATCCACCAAGGCAGCAAAAAAGTAA
PROTEIN sequence
Length: 838
LILVVTEKNDAAQQIARLLSESGKPEADKVYNTPVYRFRRGGEDHVAIGLRGHILQPDFPLALKFDKEEGWYGETAEGEHLPADVPDGLERPPYKVKRKPFMADGVDLKGWKIPSLPYLIWAPVDKQPAEKEIIRALKNLAKKAESVIIGTDFDREGELIGSDALAQVLSVNPNLAVFRARYSAFTKTEIETAFNKLVDLDYNLAAAGESRQYIDLIWGAVLTRYLTTARFGGLGNTRSAGRVQTPTLALVVERERERLAFKPEDYWVISGVAAPEDDAEATFKMVHQTARFWDQAEADAAYAVVKDQTQATVVEIESRSRKQQPPAPFNTTSLQAAAAAEGISPARTMRLAESLYMDGLISYPRVDNTVYPSSLDLKDCVRTLSAVPQYAPTCKKLLGQPKLHATRGKQESTDHPPIYPTAAANPDALQPAAWKLYNLIARRFLATLMGPATMSGTKITLDVAGQPFVANGTVLAEPGFREIYPFGLKKDDQIPDVGEGEIVSIQSLSLDAKQTEPPARYSQGKLIQEMEKRGLGTKSTRASIIDTLYQRKYLKNDPVEPSQLGMAIVDALSQFAPHITSPDMTAELESDMTSVAEGKDTRDGVVTHSRALLAGMIDTLIDHKEDLSEAIADAVTADAKVGTCPKCGKDLVAKSSLKTRGSFVGCMGWPDCDVTYPLPQGRVEPLEGEAGVCPECGAPRVKVQPFRQRAYETCINPACPTNAEPDLIVGECPTCKANGKHGDLVAHKSERTGKRFIRCTNYEECETSYPLPARGKLEKTDEVCPDCGAPMVVVTTQRGPWKLCPNYDCPGKEKKTASRRGARKSTKSTKSTKAAKK*