ggKbase home page

L1_008_000G1_scaffold_81_87

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(82043..82663)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7Z9_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 206.0
  • Bit_score: 416
  • Evalue 1.50e-113
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 417
  • Evalue 7.40e-114
50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 206.0
  • Bit_score: 416
  • Evalue 4.30e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGTTAATACCATCCTCGGCCGCAAGCTGGGCATGACCCAGGTATGGGACGAGAACGACAACGTCGTTCCTGTTACCGTCGTTCTTGCTGGCCCCTGCACCGTTTCACAGGTAAAGACTGTTGAGACGGACGGCTACAATGCCGTACAGATTGGCTTCGGCGACATCTCCGAGAAGCATGTCAACAAGCCAATGGCTGGTCACTTCAAGGCACAGGGCGTCGAGCCAATGCGTTACCTCCGCGAGGTTCGCGTTGAGGATGCTTCTGAGCACAAGACCGGCGATGTTGTCACAGTTGCTGACTTCTCTGAGGTCACCGCTGTTGACGTAACAGGCACTTCTAAGGGTAAGGGTTTCCAGGGTACCGTTAAGCGCTGGAACTTCTCTCGCGGTCCAATGACTCACGGTTCTCGTAACCAGCGTCGTCCAGGTTCCATTGGTCAGTGCGCATACCCTGCACGCGTTCGTAAGGGCCTTCACATGTATGGTCACATGGGCGCAGAGCGCGTTACGGTCAAGAACCTTAAGCTTGTCCGCGTTGATGCTGAGCAGAACCTCATGCTTATCAAGGGTGCTGTTCCTGGCGGCAAGAATGCCCTCGTCCAGGTCCGCATGGCCTAA
PROTEIN sequence
Length: 207
MVNTILGRKLGMTQVWDENDNVVPVTVVLAGPCTVSQVKTVETDGYNAVQIGFGDISEKHVNKPMAGHFKAQGVEPMRYLREVRVEDASEHKTGDVVTVADFSEVTAVDVTGTSKGKGFQGTVKRWNFSRGPMTHGSRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLVRVDAEQNLMLIKGAVPGGKNALVQVRMA*