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L1_008_000G1_scaffold_83_66

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 82540..83322

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9M6_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 260.0
  • Bit_score: 442
  • Evalue 2.50e-121
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EWC94657.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 260.0
  • Bit_score: 469
  • Evalue 2.10e-129
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 260.0
  • Bit_score: 442
  • Evalue 7.10e-122

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGTATTGATGCATGACGGCTTGATCTTGGGCCTCACTCCACAAGATTTCATTTTTAAGCTGGTTATCTTTGTTGTTGTGTTCCTTGTGGCTTTTCTTGTAGAGCGCTTTGCAATAAAACTCTCAAAAAAGGCCTTGGACTCTTCAAAACTGCCGTCAGCATCTATTTTTGTCAACATACTACGTGGAGTTATCTGGACGTTTGCTATTCTTGCTGTCTTACAGCCTGTCTTTGGTATTCAACCAACAGCTTTTGTGACCGCTTTGGGAGTTACGTCCATTGCTCTCTCTTTTGGTTTACAAGACACCATTTCTAACCTGGCGGGTGGATTGGGCCTCATGCTGGGAGGTGTAGTTAAACCTGGAGATAAGGTAAGCGTTGGAACTATCTCTGGTGAGGTTATTGACATGAATTGGCGCTCTACCATAGTTCGTGCTCGTGGAGGTAGGGTAGACATCATTCCTAATTCAGTACTTAATAAAACAGCACTTGCGCATCGTACCAGGTGGGATATGACAGAGGTGCCCATTAATATAGTGCTTAAACCAACCGTTGATCTGAATGCGGTAACGCAAGAAATAACAGAAATTGTTCAAGAGGTAGTTGCACCTCAGCTTGATAGAACACTTCCTATTGAGGTTGAAGCATCAAGCATTGCTGAGACAGGCATCAAGGTAATCATTCATGTTCACATCAAAGACGATGCAAACGAAATGAGTGTACGAGACAAAATTGTAAGAGCCCTGGCTGGTTCTAGTTGGCTTGCAGGAGTAGGAGCTTAA
PROTEIN sequence
Length: 261
MVLMHDGLILGLTPQDFIFKLVIFVVVFLVAFLVERFAIKLSKKALDSSKLPSASIFVNILRGVIWTFAILAVLQPVFGIQPTAFVTALGVTSIALSFGLQDTISNLAGGLGLMLGGVVKPGDKVSVGTISGEVIDMNWRSTIVRARGGRVDIIPNSVLNKTALAHRTRWDMTEVPINIVLKPTVDLNAVTQEITEIVQEVVAPQLDRTLPIEVEASSIAETGIKVIIHVHIKDDANEMSVRDKIVRALAGSSWLAGVGA*