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L1_008_000G1_scaffold_2496_6

Organism: dasL1_008_000G1_concoct_76_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 6056..6520

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W772_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 154.0
  • Bit_score: 278
  • Evalue 3.70e-72
Winged helix DNA-binding domain protein {ECO:0000313|EMBL:EWC94185.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 154.0
  • Bit_score: 303
  • Evalue 1.50e-79
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 154.0
  • Bit_score: 278
  • Evalue 1.10e-72

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCATCAAGCACCTACCTCACCTACTCAAGAGATGCGCATTATTCGCAATCTTGGCCATCTAGGTCATTATCTTTACATCACGCGCGGATGTCGTGGCGGTCAACAATTTATTTTGACTGCGCTCTATCGTGATGGAGATATGACACAAAAAGATCTTCTCGCCAAGACAAAGAATACCTCTGCATCTCTTTCAGAAATGGTGAGCAAACTTGAAGCAAAAGGTCTTGTTGAACGTACACGCGTAGACAAAGATCGCAGACAAACACTTCTTTCTTTGACAAAAGAAGGTCGAAAACAAGCAAAAGAAGCTCAAGAGGCCATCGAGTCATTTGAAGCACAGGCTTTGTCGGTTCTTTCAGATGAAGAAAAAGTTACATTCTGCGCATATCTAGATCGTTTAGTTGAACATTGGGACACAATTAACAGAGATGAGAAGGGAGAAACAGCATGTCAGAAGAAGTAA
PROTEIN sequence
Length: 155
MHQAPTSPTQEMRIIRNLGHLGHYLYITRGCRGGQQFILTALYRDGDMTQKDLLAKTKNTSASLSEMVSKLEAKGLVERTRVDKDRRQTLLSLTKEGRKQAKEAQEAIESFEAQALSVLSDEEKVTFCAYLDRLVEHWDTINRDEKGETACQKK*