ggKbase home page

L1_008_000M1_scaffold_3108

Search features with annotation key words

Displaying items 31-40 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3108_31
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27762..28271
DNA (510bp) protein (170aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIB1_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sigma-70 family RNA polymerase sigma factor
L1_008_000M1_scaffold_3108_32
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28273..28926
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000319BAFA
Uncharacterized protein {ECO:0000313|EMBL:CDD77694.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_3108_33
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29115..29969
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77693.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_3108_34
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30060..31373
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77283.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transporter, NhaC family (TC 2.A.35)
L1_008_000M1_scaffold_3108_35
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31527..32168
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77282.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_3108_36
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32149..32466
DNA (318bp) protein (106aa)
UPF0145 protein RSAG_01454 n=2 Tax=Ruminococcus RepID=C6JBY7_9FIRM
UPF0145 protein RSAG_01454 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_3108_37
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32719..33129
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000316D685
Uncharacterized protein {ECO:0000313|EMBL:EES77280.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_3108_38
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33248..34615)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBY5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES77279.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_3108_39
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34825..36552
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JX38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38663.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
transposase
L1_008_000M1_scaffold_3108_40
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36927..37307
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79457.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Rubrerythrin.
Displaying items 31-40 of 40 in total

View Taxonomy